Primulina eburnea: 140816548
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Entry
140816548 CDS
T11060
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140816548
Transcription machinery [BR:
pebu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
140816548
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
140816548
NCBI-ProteinID:
XP_073031986
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Position
16:complement(12610503..12614309)
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AA seq
500 aa
AA seq
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MATAAVVGLSTGKRLLSTYSYHHSDLPDKLTFIGSDQIGSNKNPINTKKSPIFISSGRPP
SQPSIRALKEHLETASDPSTLEPSLFYEETSDDPPEYLVDAILLLQKSMLEKQWNLTAGA
TTTKTDLPKEIKQPHRKKMQFFCSGTSARRRRIDSRSKALGQKCHTNRKTFSSAISPDLL
KNRLKGYGKGSVLNDELLTHQEVVLLSKKIKVGLFIEEHKCRLTARLGCEPSAEQLASSL
KISRAHLQSKLIESSLAREKLAMSNIRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEK
FDSSKGFKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLSLIRNAKAKLEEKGIAPS
VDRIAETLQMSQKKVRNATEANSKVFSLDREAFPSLSGLPGDTLHSFIADNNVENNPWFG
VEEWALKDEVYKLISSTLMERERDIIRLYYGLDGECLTWEDISKRIGLSRERVRQVGLVA
LEKLKHAARKRRLDAMLVKH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccactgctgctgttgttggactcagcactggtaaaaggctcctcagtacttacagt
taccaccactccgatcttcctgataagttaacttttatcggttcagatcagattggttcg
aataagaatcccatcaacaccaaaaagtcgcccattttcatttccagtggacgaccaccc
tctcagccttctatccgagcactcaaggagcatttggagacagcctcagatccgtctact
ctagaaccaagcctattttacgaggaaacctctgatgatcctcctgagtatttagtggac
gccattctcttattgcaaaagtctatgcttgaaaagcagtggaatcttacagctggggcg
acaaccacgaaaactgatctaccgaaagaaatcaaacaaccccaccgcaagaaaatgcag
ttcttttgttctgggacatctgccagacgccgcagaatagactctaggagcaaagcttta
ggccagaaatgtcatactaatagaaaaacgtttagttccgctatcagtccagatctgctt
aagaatcgcttgaaaggatatggaaagggtagtgttttgaatgatgaattgctcacccat
caagaagtcgttctactttcaaaaaaaatcaaagtgggtctttttatagaagagcacaag
tgcagattgacagcaagattgggatgtgagccttcagccgagcagctagcaagttcattg
aagattagtcgtgctcatttacagtcaaaattgattgagagttcattggcaagagagaag
ctagcaatgagcaatatccgccttgtcatgtctattgctcaaagatatgataatatggga
gctgaaatggctgaccttattcaggggggtctgattggacttctccggggtattgaaaaa
tttgattcttctaagggatttaagatctcaacttatgtttattggtggattcgacagggt
gtttcaagaactttagttgagaactcaagaaccctgagattgcccacacatttacacgaa
agactgagtttaattcgaaatgcaaaagccaaacttgaagagaaaggaattgctccatca
gtagatagaattgctgaaactcttcaaatgtctcagaaaaaagtcagaaatgccactgag
gcgaacagcaaggttttctctcttgacagggaagcgttcccatcgttaagtggtcttcct
ggtgacactcttcatagtttcattgcagataataatgttgagaataacccatggttcgga
gtcgaggaatgggcccttaaggatgaagtatataagctcatatcttcgacgttgatggag
cgtgagagagatatcattaggctctactatggcctagatggcgagtgtctcacttgggaa
gacattagcaaacggatagggttgtccagggagagagtgaggcaagtggggcttgttgca
cttgagaaactaaaacacgctgcaagaaagaggagattagatgccatgttagtcaaacat
tga
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