KEGG   Primulina eburnea: 140816689
Entry
140816689         CDS       T11060                                 
Name
(RefSeq) WD repeat-containing protein RUP2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
pebu  Primulina eburnea
Pathway
pebu04120  Ubiquitin mediated proteolysis
pebu04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140816689
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    140816689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pebu04121]
    140816689
Enzymes [BR:pebu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140816689
Ubiquitin system [BR:pebu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    140816689
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     140816689
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EIPR1 EIF3I Beta-prop_DCAF4 Beta-prop_DCAF12 WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_NOL10_N YNR034W-A-like Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 140816689
NCBI-ProteinID: XP_073032191
LinkDB
Position
16:complement(19333169..19334532)
AA seq 388 aa
MKNFSSHFSTQNPPSCSVSDTSQGEENEKRSQQSLQDDDQEEEARCEWDFSLSTVISSFS
STVSDAIGVVEFDQSDTLLATGGIARKIRVYNVHNSILSPESREGGVRFLDHAAACDYYM
CTPAKLSSLKWKPGSGSRVLGSGDYDGVVMEYDLERRVPIFERDEHGGRRVWGIDYSISE
PIIGASVSDDGTMQMWDPRCDTGSCLASVQPNRAARNPVCSVEFNPFGGPLVTVGCTDRK
IYGYDIRQTVDPVFVLDGHQKPVTYTRFLDSQTIVSSSIDGCLMMWNTKNLRLIRTYRGH
VNYKRFVGLSVWRNGGLLSCGSENNHIFVYDKRWGNPIWVRGFDLVAPTDRSFVSGICWR
QMGEDRCTLVAGGSNGVLQVIKGERKAW
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaaaaacttttcgtcccatttctccacccaaaatcctccaagctgctcagtttcagac
accagccaaggagaagaaaacgaaaaaagaagccaacaatcactacaagatgatgatcaa
gaagaggaagcaaggtgcgaatgggatttcagcctctccaccgtcatatcctccttctcc
tccaccgtctccgacgccattggggtggtggagttcgaccaaagcgacaccctcttggcc
acaggcggcatcgccagaaaaatcagagtttacaacgtccacaattcaattttgtcgccc
gagagtcgcgagggtggagtcaggttcctcgaccacgccgcagcatgcgattactatatg
tgcacaccggctaagctcagcagcctcaaatggaagcccggatcggggtctcgggttctc
gggtccggagactacgatggggtggtgatggagtacgatctggagagacgggtgcccatt
tttgagcgcgacgagcacggcgggaggcgtgtttggggcattgactattcgatatccgaa
ccgattatcggagcatccgtttcggacgacggaaccatgcaaatgtgggacccgcggtgt
gacacgggaagctgcctcgcgtctgtgcagccaaatcgggccgcccgtaacccggtttgc
tcagtcgagttcaacccgttcggtggacctctcgtcaccgtcggatgcaccgatcggaaa
atatatggctacgatatccggcaaacagtcgacccggtctttgtcctagacgggcaccag
aaacccgtgacatataccagatttcttgattcgcaaacaatcgtttcctcgtccatcgat
ggatgtttgatgatgtggaacacaaaaaacctaaggctgatccgaacttacagaggccac
gtaaactacaaaagattcgtgggtttatctgtttggagaaacggaggattgttaagctgt
ggatcagagaataatcatatttttgtgtatgataaaaggtggggcaacccgatttgggtc
cgcgggttcgatttggtggctccgaccgaccggagtttcgttagcggcatttgctggcgg
cagatgggggaggaccggtgtaccctggtggccggcggctcaaatggggtgttgcaagta
attaagggtgaaaggaaggcttggtaa

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