Primulina eburnea: 140817189
Help
Entry
140817189 CDS
T11060
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140817189
Transcription machinery [BR:
pebu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
140817189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
VASP_tetra
Sigma70_r4_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
140817189
NCBI-ProteinID:
XP_073032926
LinkDB
All DBs
Position
16:23749137..23753544
Genome browser
AA seq
518 aa
AA seq
DB search
MGVVTISSSAARNPFGLNSRISSRIAVVKRPVILSFKTDKSKNTALVAPPKSLSLPVETD
QGNEKTLRKGKRPSGRVHTASLDEASSSTLDQLDYNEAAAKLENLFKRSHATTLSENEVK
DHVAKRRRQMRKRIGEDMVDVEKKKVAESFVLSFRKKEKRLSLEKRIALRCRKESESLGS
SQKRKLGKNYDHEKIDRLVRDYSSSTNLVSLDWKKMQIPPVLSSSEHSWLFKLMQPMKEI
LQVKESLQNDLRRDVRDEELAEAINMGITHLRKRLEVGRAARSKLIKHNLRLVLFAMNKY
FHDLANGSRFQDLCQAGVKGLITAIDRFESKRNFRLSTYGLFWIRHAIVRSMTLSSFTKV
SFGLESVRAEIQKAKQELLSELQRLPTEKEIIDRVGISPERYHEVMRVSKPIYSLNARNR
VTQEELINGIEDGIEGDKRSQPALLRLALDDVLDSLKPKESLVIRQRYGLDGRGDRTLGE
IAGNLNISREMVRKHEVKALMKLKHPARVDYLQRYIFK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactatttctagttctgctgcacgaaatccgtttggattgaactcaaga
atttcatctcgcatagcagtagtgaaaaggccagtaatactatctttcaaaactgataaa
agtaaaaatacagctctagttgcgcctccaaaatcactctctttacctgttgagactgac
caaggaaatgaaaagacgttaagaaaggggaaaaggccttcaggaagagtgcatactgcg
tctcttgatgaagcctcctcaagtactttagatcagttggattacaatgaagctgcagct
aaattagagaatttattcaaacgaagccatgcgacaactttgtctgagaatgaagttaaa
gatcatgtggctaaaagaaggcggcaaatgaggaagaggattggagaagatatggtggac
gtggagaagaagaaagttgctgaaagttttgtcctaagttttaggaagaaagagaagaga
ttgagtcttgagaagaggattgcattgagatgtaggaaagaaagtgaaagtcttggatcg
tctcagaaaaggaaacttggtaaaaattatgatcatgagaagatcgataggcttgtgagg
gactattcatcttccaccaacttggtcagcttagattggaagaaaatgcagattcctccc
gttctttcttcatctgagcatagttggctgtttaagctgatgcaaccaatgaaggaaatt
ctccaagtaaaggagtcgttacagaatgatttacgaagagatgtaagggatgaagaatta
gcagaagcgataaatatgggcatcactcatctgagaaaacgtttggaagttggtcgtgct
gccagaagcaagttgatcaagcataacctccgtttggttttatttgcaatgaacaaatat
ttccatgacttggctaatggctcaagattccaagacctctgtcaggctggagtgaagggt
cttataacagctattgatcgctttgagtctaaaaggaacttccgtctctcaacatatggc
ctcttttggatcagacatgccatcgtccgttctatgacactttcaagcttcacaaaggtt
tcctttggccttgagtcggttagagcagaaatccagaaggcaaaacaagagttgttgtct
gagcttcagagattgccaacagagaaagaaatcatagacagagttggtatatctcctgaa
agataccatgaagtgatgagagtgtcaaagcccatttattctctgaatgcacgaaacagg
gtaactcaagaagaattgatcaatggcattgaagatggtattgaaggggataaaagaagt
caacctgcgcttctcaggcttgccctggatgatgtgcttgattctttgaaaccaaaggag
agtctggtgattagacaacggtatggcctagatggcagaggagatagaaccctcggggaa
attgcaggaaacttgaatatttcgagagaaatggtcagaaaacatgaagtaaaagctctc
atgaaactcaagcatccagctcgagtggattatcttcaacgctacattttcaaatga
DBGET
integrated database retrieval system
