Primulina eburnea: 140817769
Help
Entry
140817769 CDS
T11060
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
pebu Primulina eburnea
Pathway
pebu03082
ATP-dependent chromatin remodeling
pebu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140817769
03083 Polycomb repressive complex
140817769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pebu03036
]
140817769
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140817769
Histone modification proteins
HAT complexes
HATB complex
140817769
HDAC complexes
Sin3A-HDAC complex
140817769
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140817769
PRC2.2
140817769
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140817769
Heterochromatin formation proteins
Other heterochromatin formation proteins
140817769
Chromatin remodeling factors
NuRD complex
140817769
NuRF complex
140817769
NuRF complex (fruit fly)
140817769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
140817769
NCBI-ProteinID:
XP_073033654
LinkDB
All DBs
Position
17:complement(4547947..4555846)
Genome browser
AA seq
494 aa
AA seq
DB search
MEATPTTEPKKRGRPKGSTKSKGDKEKDSGGGGGAAQPRMRGSGGEKRNAAAEESYAHWK
LLVPVLYDWLAHHNLVWPSLSCRWGPVLEQGNYKTKQRLYLSEQTDHTQPNTLIIANCEV
VKPRVASENHIANFNEDARSPYVKKYKTILHPGEVNRIRELPQNKNIVATHTDCPEVLIW
DVESQPNRHAVLGAAESRPDLVLSGHQDNAEFALAMCPAEPFVLSGGKDKTVVLWSIQDH
VSSLATDLTQSAESTSSIVKAADNSPVGPRGIFQGHTDTVEDVQFCPSSSQQFCSVGDDS
CLILWDARIGNSPVVKVEKAHNADLHCVDWNSQDENYILTGSADHTVCMFDRRSLTSDGV
GSPVHKFEGHTAAVLCVQWSPDKRSVFGSSADDGLLNIWDYEKVGNQEEAASKSPNTPSG
LFFQHAGHRDKVVDFHWNANDPWTIVSVSDDGEFSGGGGTLQLWRMIDLLYRPKDEVLEE
LQQFKDHVIECAKT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggaggctacgccgactactgagccgaagaagcgtgggaggcccaagggttccaccaaa
tccaaaggagacaaggagaaagactcaggcggtgggggaggggcggcgcagcccagaatg
agaggctcgggtggtgaaaagagaaatgccgccgccgaagagagctacgcgcactggaag
ctgctggtgccggtgctgtacgactggctcgcgcatcataacctagtttggccgtctctc
tcttgccgttggggcccagttcttgagcaaggaaactacaagaccaaacagcgtctttat
ctatctgaacaaaccgatcacacacaaccaaacactttgattatagcaaattgtgaagtt
gtcaagccccgagttgcttcagaaaatcacattgctaatttcaatgaagatgcgcgttcg
ccgtacgtcaagaagtacaaaactatcttacatccaggagaggtgaacagaatcagagaa
ctgcctcagaataaaaatatagtagcaacacacactgattgtcctgaagttcttatttgg
gatgttgaatcccaacctaatcgacatgctgtccttggagctgctgaatctcgtccggat
ttggtgttgtctggacaccaagataatgcagaatttgctcttgcaatgtgcccagctgaa
cctttcgtactttctggagggaaggataaaactgtggtactgtggagtattcaggatcat
gtttcatctctggccacagatttaacccagtctgctgaatccaccagttcaattgtgaaa
gctgctgataattctcccgttggtccacgtggaatttttcaggggcacactgatacagtt
gaggacgttcaattttgcccatcaagttcgcagcagttttgtagtgtcggagatgattcc
tgcttgatactgtgggacgcgaggattggcaacagtccggttgttaaggttgaaaaggca
cataatgctgatcttcattgtgtagattggaattctcaggatgaaaattatatattaact
gggtccgcggatcacacagtttgcatgtttgatcgccgtagtttaacctctgatggagtt
ggatcgcctgtccataaatttgaaggtcacactgctgctgttctttgtgtccagtggtca
cctgacaagcgctcagtctttgggagttcagcggacgatggattgttgaacatttgggac
tatgagaaggttggtaaccaggaagaagctgcgtccaaatctcctaatactccatcaggg
ctgtttttccaacatgctggacacagggacaaggttgttgacttccactggaacgccaat
gatccatggacaattgttagtgtatcggatgatggggaattctctggtggaggtggtacc
ttgcagctgtggcgaatgatagatttattataccggcccaaggacgaagttctggaagag
cttcaacagttcaaggaccatgtcattgagtgcgccaagacttga
DBGET
integrated database retrieval system
