Primulina eburnea: 140818848
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Entry
140818848 CDS
T11060
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pebu Primulina eburnea
Pathway
pebu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140818848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140818848
Enzymes [BR:
pebu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
140818848
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
HECT type E3
140818848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TRIP12_N
HECT
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
140818848
NCBI-ProteinID:
XP_073035008
LinkDB
All DBs
Position
17:19361679..19371567
Genome browser
AA seq
1535 aa
AA seq
DB search
MENRGQKRTETVDELPADKRACSSFEFRPSTSNSSAQTPMSSSHEAHDAEMETSSSTSGS
TRSEVDGEKESTNGSCDSDSSLRDYYRHQSTSDHTKFKKVLSSLSEQFEESVQLALLTEL
CELLSFCSDSSLSSLMADSFSPLLVKLARHEGNPDIILLSIRAITYLCDANPRSSGFLVR
HDAVPTLCQRLMAIEYLDVAEQCLQALKKISREQPLACLQSGAIMAVLSYIDFFSTSVQR
IALSTVVNICKKQNSESPSFFMEAVPILCNLLQYEDRQLVESVATCLIRIVEQVYHSPDM
LDEICRHGLVQRAVHLIGLNSRTTLCQLTNTGLIGLLAKMAAGSTIAFKALFELNISSTV
KDMLSSYDLSHVTHSIAMLDGHYSQIHEVLKLLNELLPAVCIEQDGQLKSDKEDFLLSHP
DVLPKFGVDLLPILIRVVSSGVNLILSYGCLSVIYKLVHFSTSEMLRSLLQTATFSSFLA
GVFARKDHHVILLALQIVDTLMLKLPRVFLNSFMKEGVLFAILALISPDKDLKLFPVFDG
MCLETNGAQKSSCREVYRCPCYAFDKGQSSKSPENRCCKLQEDTVHNLARHIWGTFFETE
SMNREKGVTDILQKLRNLSIALTTLLSNSQEDATCSQLEEEIYGVLHQIVSELNEKDSIS
TFELVESGVIKALVTYVSNGMHLVGQETNDTANLCYQTEKRFEVFGRLLLSCTDPALEKF
PLLTIVRRLQSALSSVENFPVVLNHASKLRNSYATVPYGRCTSYPCLKVKFEREKGENSL
RDYSEDIVNVDPFLPLDAIEGFLRPRVCNIDPKNSTVWSKELKENDSASSHSPSYSNDPI
YKFADGIVSTEMVVDVHKPQDGRWDILLPSPRDTESTASSGREILDAEKITRVDMAAFQQ
EEDNNLQKDDAVKTDQPRRSNSEETSQKLYFCFEGQQLDCKLTLYQSILKQQNELEHDII
PSACLWTRVYKITYKRSSFCQPSSCNSGPVFSEVDVEKLRSADDILFLLRSLERINRMRL
HQMSCQRMHVFAEGRTGDLDKFDVAVYDVSQNEFVNSKLSEKLEQQMRDPMAVSVGGMPA
WCTQLMAWYPFLFAFEVKCKYFHIAAFGRSPAQILPSSQTYDGSSSARQQNHGNFPRKKF
LVNRNTILESAARMMELNAHQKVLLEVEYNEEVGTGLGPTLEFYTLVCHEFQRNGLRMWR
EDQVDCLNSAEAENLGFLDSPVGLFPRPWSPSLSTESSTPFSEVIKKFKLLGQIVAKALQ
DGRVLDLPFSDAFYKLVLDKELTVHDIRSIDPSLGKALLEFQAVVERKRCLRSLSVEESQ
DPGVGVCFRSIKIEDLCLDFTLPGYPDYDLVSAPDSKMVNLDNIEEYITLIVDATIKSGV
SRQVEAFKSGFDQVLSVQHLKVFTEEELERLLCGEHVLWNSDELLDYIKFDHGYTISSPP
VVNLLEIMREFDREQQRAFLQFVTGAPRLPTGGLASLNPKLTIVRKHCGKWIDADLPSVM
TCANYLKLPAYSTKEVMKEKLLYAITEGQGSFHLS
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagaggtcagaagagaactgaaacagtggatgaattgccagccgacaagaga
gcgtgcagttcgtttgagttccgtccgagcacctcaaactcgtctgcccaaacaccaatg
agctcttctcatgaagcccatgatgctgaaatggaaacatcgtcttccacttctgggtca
acaagatcagaggttgacggagagaaggaatcaactaatggctcgtgtgattcagatagt
agtctccgtgattattataggcatcaatcaaccagtgatcacactaaatttaagaaagtg
ctgtcgagtttgagtgagcagtttgaagaatcagtacagttggctctactcaccgagctt
tgcgaattgctatccttttgtagtgatagttctttatcgagcctaatggccgactctttt
tccccattactcgtcaagctggcgagacatgagggcaatcctgatataattctcttgtca
ataagggcgataacttatttgtgtgatgctaatcctcgatcctctggttttcttgtgagg
catgatgctgtccctactctttgtcaaagattaatggctattgaatacttggacgttgca
gagcaatgtttgcaagctttaaagaaaatttcacgtgagcaacctcttgcttgcttgcaa
tctggtgcaatcatggctgttttgagttatattgatttcttctcaacaagtgtgcagagg
attgcgctttcaactgtggtcaatatatgtaagaaacaaaattctgaatctccttcgttt
ttcatggaggcagttccaattttgtgtaatcttctacagtatgaggatagacagcttgtt
gaaagtgtggccacttgcttgattagaatagttgagcaagtctatcattctccagatatg
cttgatgaaatttgtaggcatgggctggtacagcgtgcagtacatctcattggcttaaat
agtcgcactaccctttgccaattgacaaatacaggcttaattggattacttgccaagatg
gctgctggctctactattgcatttaaggcactttttgagctaaatataagcagcacagtg
aaggacatgctatcctcttatgatctgtctcatgtaacacactctatcgccatgttggat
ggacattacagtcagatacatgaagttttgaagttattgaatgagcttctcccggcagtt
tgtatagaacaggatggtcaactaaagtcagacaaggaggattttcttttgagccatccc
gatgttctccccaagtttggagttgatttacttcctatattgattcgggtggtgagttct
ggcgtcaatctgattttatcttacggctgtctctctgttatctataagttagttcatttc
agcacgtcggagatgcttcgaagtttgctacaaactgctaccttttcaagcttcttggct
ggagtatttgcgagaaaggatcatcatgtaatattattggctcttcaaattgttgatact
ttaatgctcaagcttccacgtgttttcttgaattcctttatgaaggaaggtgtcctgttt
gccatcttggcactgatttctccagataaagatttgaaactctttccagtttttgatggc
atgtgcctggaaactaatggagcacaaaaatcatcttgccgagaagtatacagatgcccg
tgttatgcatttgataagggtcagtcttcaaaatctcccgaaaatagatgctgcaagctt
caggaagacactgtacataatcttgctaggcatatttggggtacattctttgaaactgaa
tcgatgaaccgtgagaaaggtgtcaccgatattcttcagaagctcaggaatttatcaatt
gcattaacaaccctgttgagtaactcccaggaggatgctacttgcagtcaactggaagaa
gagatttatggtgtattgcatcaaatagtctcagagcttaatgagaaagactccatttcc
acttttgagttggttgagagtggggttattaaagcactagttacctacgtatcaaatggg
atgcatcttgtaggacaagaaaccaatgatacagctaatctatgttaccaaactgaaaaa
aggtttgaggtgtttggacggctactattgtcatgcactgatccagctttggagaaattc
ccccttttgacaattgtacgaagattacaaagtgctctgtcttctgttgaaaatttccct
gttgtcttaaatcatgcatctaagctgagaaactcttatgctactgttccatatgggcgt
tgcacttcatatccatgtctcaaagttaagtttgagagggaaaaaggggagaactctctt
cgcgattactctgaagatattgtgaatgttgaccctttcttgcctctggatgcaattgaa
ggatttttgcggcctagagtttgtaacattgaccccaagaattcgactgtgtggtcaaag
gaattaaaggagaatgatagtgcaagttctcattcaccatcgtactcgaatgatccaata
tacaaatttgctgatggtatcgtgtctacagaaatggttgttgatgttcataaaccacag
gatggaaggtgggatatattgttgccttcacccagagatacagaaagtacagcaagttct
ggacgagaaattttggatgcagagaaaataactcgggtcgatatggctgcttttcagcaa
gaggaggataataatcttcaaaaggatgatgctgtaaaaacagatcaaccaagacgcagt
aacagcgaagaaacttcacagaagttatatttttgtttcgaagggcagcaactggactgt
aaattgacactgtatcagtctatactcaaacagcaaaatgaactagaacacgatattata
ccgagtgcatgtttgtggactcgtgtttataaaataacttataaaagaagttcattttgc
cagccatcttcatgtaattcaggaccagttttttctgaagttgatgtggagaaattgcgg
tcagctgatgacatattattccttctgaggagcttggaaagaataaacagaatgagactt
caccagatgtcttgtcagagaatgcacgtgtttgctgaaggaagaacgggtgatttggat
aagtttgatgtagcggtttatgatgtttcccaaaatgaatttgtcaacagtaagttgagc
gaaaaactggaacagcagatgcgagatcctatggctgtctctgttgggggtatgcctgca
tggtgcacccagttaatggcttggtacccatttttatttgcttttgaagtaaagtgtaaa
tatttccatattgcggcatttggcagatcaccagctcaaattcttccatcatctcaaact
tacgatggaagttctagcgccaggcagcaaaatcacgggaactttccacgcaagaagttt
ttggttaacaggaatacaattctagaatctgctgctcgcatgatggaactcaatgcccat
caaaaggttcttcttgaagtggaatataatgaggaggttggtactggtcttggtccaacg
ctggaattctacacactggtatgccacgagtttcagagaaatggcttgcgaatgtggaga
gaagaccaagttgactgcttgaattctgcagaggctgagaatcttggatttctggattct
cctgttggactcttcccccgaccttggtcaccttcattgagtacagaaagtagcacacca
ttttcagaagtgattaaaaagttcaaacttttgggtcaaatagttgcaaaagcacttcaa
gatggaagagttttagatcttccattttctgatgctttctataaacttgttctggacaag
gaacttactgtgcatgacatccggtcaattgatccttcattaggaaaggctttattagaa
tttcaggctgtagtagaaaggaagaggtgtttgagatccctttctgtagaagaatcacaa
gatcctggcgtgggcgtgtgtttccggagcataaaaattgaggatctctgccttgatttt
actcttccagggtatccagattatgatcttgtctctgcacctgattcaaagatggtaaat
ctggacaatatagaggaatatattaccctcatagttgatgctacaataaagtctggagtt
tctagacaagtggaagcatttaagtcaggttttgatcaggtcttatctgtccagcatctt
aaagttttcaccgaagaagagttggaacgcttactgtgcggagaacatgtactatggaat
tcggacgagcttttggattacattaaattcgaccatggatacactatcagtagtccccca
gttgtcaatttacttgaaatcatgcgagagtttgaccgtgagcagcaacgagcattcttg
cagttcgtgactggtgcgccccgccttcccactgggggcttggcttctctcaacccgaaa
ctgacaatagttcggaagcattgtggcaaatggatagacgcagacttacccagtgtgatg
acctgtgcaaattatctgaagctcccagcttactcaacgaaagaagttatgaaagagaag
ctgctatacgccataaccgaagggcaaggatcattccacctttcataa
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integrated database retrieval system
