Primulina eburnea: 140819357
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Entry
140819357 CDS
T11060
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140819357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140819357
03110 Chaperones and folding catalysts [BR:
pebu03110
]
140819357
03029 Mitochondrial biogenesis [BR:
pebu03029
]
140819357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pebu04147
]
140819357
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
140819357
Messenger RNA biogenesis [BR:
pebu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
140819357
Chaperones and folding catalysts [BR:
pebu03110
]
Heat shock proteins
HSP60 / Chaperonin
140819357
Mitochondrial biogenesis [BR:
pebu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
140819357
Exosome [BR:
pebu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140819357
Exosomal proteins of other body fluids (saliva and urine)
140819357
Exosomal proteins of breast cancer cells
140819357
Exosomal proteins of colorectal cancer cells
140819357
Exosomal proteins of bladder cancer cells
140819357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
140819357
NCBI-ProteinID:
XP_073035509
LinkDB
All DBs
Position
18:complement(32591212..32600529)
Genome browser
AA seq
577 aa
AA seq
DB search
MYRAAAAAIASSFRSSTSRNLVKVCSRVVSSRNYVAKDISFGTGARAAMLAGVDELAEAV
KVTMGPKGRNVIIQKSRRNPQVTKDGVTVAKSINFLDKAKNVGADLVKQVAEATNKVAGD
GTTCATVLTQAIFKEGCKSVAAGVNVMDLRKGINMAVDAVIADLKSGALMISTPEEITQV
ATISANGESEIGEMIAQAMEKVGKEGVITVADGNTMDNELEVVEGMKLARGYISPYFVTD
EKTKKCELENPLILIHEKKISDMEALVRVLELTVKRNRPLLIVAEDVESESLTMLVLNKH
HGGLKVCAIKSPGFGDNRRANLEDLAILTGGEIISAEYGTSLNKVQIDMLGSAKKVTVSV
DDTLILHGGGNKKLIEERCEQLRTAFETSTAVFDKEKAQERLSKLSGGVAVFKVGGGSEA
EVGERKDRVTDALNATRAAVEEGIVPGGGIALLYATRVLKDLQTANEDQRRGVEIIENAL
KAPTSTIASNAGVDGALVVGKLLEQDDLNLGYDAASGEYVNMVKAGIIDPVKLIRTALLD
AASVSILLTTTEAAVVDSKCEKNPLRNRMPNMDDMGY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtacagagccgccgctgctgctattgcttcgtcattcaggtcatctacctccaggaac
ttagtcaaggtatgtagtagagttgtttctagcagaaattatgttgccaaggacattagc
tttgggaccggagctcgggcagctatgctagctggagttgatgagctcgccgaagcagta
aaagtgaccatgggtccaaagggccgcaacgtaattattcagaaaagtagaaggaacccc
caggtgacaaaggatggtgttactgtagccaaaagcataaattttttggataaggcaaaa
aatgtcggcgcggatcttgtgaagcaggtcgcggaggcaacaaataaggttgctggtgat
ggtaccacttgtgctactgtgctcactcaggcaatattcaaagaaggatgcaaatcagtg
gctgccggtgtaaatgtgatggacctgcgcaaaggtatcaatatggctgttgatgctgtt
attgcagatttgaagagcggagcactcatgattagcacccccgaagaaattacacaggtg
gccactatctctgcaaatggtgaaagtgaaattggtgaaatgatagcacaggctatggag
aaagttgggaaggaaggagtcattacagttgcggatggtaataccatggataatgagttg
gaagtggtggaagggatgaagctagcccgtggttatatctctccttattttgttactgat
gaaaaaaccaaaaaatgcgaacttgaaaatcctttaatcctaatccatgagaagaaaatt
tcggacatggaagcacttgttagagtattggaactgaccgtgaagagaaaccgacctcta
ttaattgttgcagaagacgtggaaagcgagtcacttactatgcttgtcctcaacaagcat
catggaggtctgaaggtttgtgctatcaaatctcctggttttggagataacagaagagca
aatttagaagatcttgccattctcacaggaggagagattataagtgcagaatatggaact
agtctgaacaaagttcagattgatatgcttggttccgctaaaaaggtaacagtttcagtt
gatgacactttaattctacatggaggagggaataagaaactgattgaagaaaggtgcgag
cagttaagaactgcttttgagaccagtactgcagtgtttgacaaggagaaagcacaagaa
aggctgtcaaaattgtctggaggtgttgcagttttcaaggttggagggggtagtgaagca
gaagttggagaaaggaaggatagggtgacagatgctcttaatgcaacaagggctgctgtg
gaggagggcattgttcctgggggtggcattgctcttttgtatgccactagagttcttaag
gaccttcaaactgcgaatgaggaccaaagaagaggcgttgaaataattgagaacgctcta
aaggcacctacttctactatagcatcaaatgctggtgttgatggagctcttgttgtaggc
aagctattggaacaagatgatctgaatttgggctatgatgctgcatcaggtgaatatgtt
aacatggtaaaggctggaatcatagatcctgtgaaacttattagaacagctttgttagat
gctgcaagtgtctccattctattgactaccaccgaggcagccgtcgtggactctaaatgt
gagaaaaatccccttagaaatcgcatgccgaacatggatgacatggggtattga
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