Primulina eburnea: 140819359
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Entry
140819359 CDS
T11060
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pebu Primulina eburnea
Pathway
pebu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140819359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140819359
03036 Chromosome and associated proteins [BR:
pebu03036
]
140819359
Transcription machinery [BR:
pebu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140819359
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140819359
PBAF complex
140819359
GBAF(ncBAF) complex
140819359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
DUF3306
SWIRM-assoc_3
DUF5830
ZZ
Motif
Other DBs
NCBI-GeneID:
140819359
NCBI-ProteinID:
XP_073035515
LinkDB
All DBs
Position
18:1878187..1884084
Genome browser
AA seq
768 aa
AA seq
DB search
MPASTSEGRSRWRKRKREHQAGRKSKLKEPEKDDAFEDNEDDEDPDLDPPQNHLETDDDP
HNQNLDRISQISRERESENLMDGGLKICDFPVAIKRVVNRPHSSVFGIVEVERAARNGES
RDQGHGGVAMLENVSYGQLLALSAVPRDSSALLGASLEDTASGSGVGSYVVKPPKVIPGR
GVTKRLGSACRVHVVPAHADWFSPNSVHRLERQVVPLFFSGRSAEHTPERYMEGRDCIVA
KYMENPEKHLSIADCRGLATGFDADDTNRVFRFLVHWGIINYCATPLKHEVPKDGTYLCE
ESNGELRVPSNALKSIDSLIQFDKPRCRLKATDVYPELAHQCDEDADFESSIREQLSDHQ
CNYCSCSISTAYYQSQKVADVLLCVDCYHEGRFVAGHSSLDFMKVSFMKYFRDVDGDSWS
DQETLLLLEGMQLYEENWSKIADHVGSKSKDQCLLHFVRLPLDSTPLDSIDVATTSGSSN
MCNGDDFGKSVPNSNGFNSRMYDSESKVLITNSGNPVMNLVAFLASAMGPRVAAACAHAA
LLELSKDGSKDGTPHEEIMNISKKGPWSEHDTEAVPLSAERVRTAAKYGLAAAALKAKLF
ADHEEREIQRLSANIINHQLKRLELKLKQFAEVETMLMRECEQMERARQRISAERGLMMS
AQFGSGVPSRPTAVPGVGATNLNDNAAGNNRQPGSQQPFISGYSNNQPIHPRMPLGQQGA
YGLGPRLPLSALHPSSSNSNAFNPSSGSPSSLGHPMLRPVSGTKSGLS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttccacctcagagggaagatcgaggtggaggaaaagaaaaagagagcaccaa
gccggccgaaaatctaagctaaaagagcccgagaaagatgatgcatttgaggacaatgag
gatgatgaagaccccgatctggacccaccccaaaatcaccttgaaactgatgatgatcct
cacaatcagaacttggataggatttcccagatatcgcgagaaagagagagtgaaaatttg
atggacggtggattgaaaatttgtgatttcccagttgcgatcaaaagagtggttaataga
ccacattcatcagttttcggaattgtggaagtggagagggctgcaaggaatggcgagagc
agagatcaggggcatggtggtgttgctatgttggaaaatgtatcatatgggcagctgctg
gcgctgtctgccgtaccccgggatagttcagctctattaggggcttcattggaggatact
gcaagcgggagtggggttgggtcttatgtggtcaagcctcctaaggtaattcctggccgt
ggggttactaaaaggcttgggagtgcatgtcgtgtgcatgttgttcctgcacatgcagat
tggttttccccaaattcagtacatcgattggagcgacaagtggtgccactttttttctct
ggtaggtcggcagaacatactccagagaggtacatggagggtcgtgactgcatagtagcc
aagtatatggagaatccggaaaagcatctatctattgctgattgtcggggactagcaact
gggtttgatgctgatgatacaaatcgagtttttcggtttcttgttcattgggggataatc
aactattgtgcaacgcctcttaagcatgaggttccgaaggatggcacatacttatgtgag
gaatcaaatggtgaacttcgcgtgccttctaatgctttgaaatctatcgatagtttgatc
caatttgataagcccaggtgtaggctcaaggcaactgatgtctatccagaacttgcacat
cagtgtgatgaggacgctgactttgaaagttccatccgagagcaattatccgatcatcaa
tgcaattactgttcttgttctatatctaccgcgtactatcagtcacagaaagtggctgat
gtgctgttgtgtgtggattgctatcatgagggaagatttgtcgctggtcactccagcctg
gattttatgaaggtcagtttcatgaaatatttcagggatgtggatggggatagctggagt
gaccaggaaacgttactgctgctcgagggaatgcagctgtacgaagaaaactggagtaaa
attgcggatcatgttggttcgaaatcaaaagatcagtgcctccttcatttcgtgcgactt
cctctagattccactccccttgacagtatcgatgtcgcaactacttctggttcatcaaat
atgtgcaatggtgatgattttggaaaatcagtaccgaattcaaatggattcaactcgcga
atgtatgattctgaaagcaaagtcctgattacaaattctgggaatccagtgatgaacttg
gttgccttcctggcctctgcaatgggaccaagagtagctgctgcatgtgcccacgcggcc
ttgcttgaattatctaaggatggaagcaaggatgggacccctcatgaagaaatcatgaat
attagcaagaaaggtccatggagcgaacatgatactgaagctgttccattatctgctgaa
agagtgagaactgctgcaaaatacggtcttgctgctgccgctttaaaggcaaaacttttc
gctgatcacgaagagcgtgaaatccaaaggttatctgctaatattataaaccatcagttg
aagagattagagcttaagctgaagcagtttgcagaggtggagaccatgcttatgagggaa
tgtgaacagatggaacgggcaaggcagaggatatcagcagaacggggcctcatgatgtcg
gctcagttcggatctggtgtaccatctcgaccaactgctgtacctggcgtaggtgctacc
aatttgaacgacaacgctgcaggaaataacaggcaaccaggatctcagcaacctttcatt
tccgggtacagcaataatcaacctatccaccctcgtatgcccctcgggcaacagggggca
tatgggctgggaccgaggctgcccctttcagctttacacccatcttcttcgaactctaat
gcattcaacccttcatcgggttctccgtcttctctgggccacccaatgctcagacctgtc
tccgggactaaatctggtttaagttaa
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