Primulina eburnea: 140819505
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Entry
140819505 CDS
T11060
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140819505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pebu03041
]
140819505
03009 Ribosome biogenesis [BR:
pebu03009
]
140819505
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140819505
Spliceosome [BR:
pebu03041
]
Complex A
U1 snRNP components
U1 related factors
140819505
Complex B
140819505
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
Pre-60S particles
Helicases
140819505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
140819505
NCBI-ProteinID:
XP_073035729
LinkDB
All DBs
Position
18:28622209..28626855
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AA seq
661 aa
AA seq
DB search
MYNNYDPRLQDAASYRQRRSGFMGQPPIEIPPPVPSVGPPPSYDRGRGHASYGAIPMVPP
HTAVGVRAGGGSVGFSGYPSVDHGVGRGYNVSYGGDFSDRGRGGVGGRGFNNSGFGDRRG
GGRSHDSGRGASVSGRGFNPSHSRGRNVDEFGSGRGAIRGGFDGGRGARGGRPRGDDLDY
VNLPEQDFRGLVGFKKDFYMENPSVRAMTELEVSMYRARREITVEGHDVPRPIRIFQEAN
FPDYYLEVIARLGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAFVHVSAQP
RLRQGEGPVVLVLAPTRELAVQIQEEAVKFTSYANIRSTCIYGGAPKGPQVRDLKRGVEI
VVATPGRLIDMLEAQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSA
TWPREVETLARQFLRNAYKVIIGSLHLKANQSIHQVVEVMSDLEKYNRLIKLLKDLMDGS
KILIFVETKKGCDQVTKQMRMDGWPALSIHGDKTQDERDWVLAEFKSGRNPIMVATDVAA
RGLDVKDIKCVINYDFPTSLEDYVHRIGRTGRAGARGMAFTFFTHGNAKHARELIKILQQ
AGQVVPPQLSAMARTGGSNMGASGSNIRGRGWGRGRGGGAFGNRGAVSGTNTIPLGGKRP
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaactacgatcccaggctccaggatgcagcatcctatcgccagcgccgaagc
ggtttcatgggacagccgccgatagagattccgcctccagtgccaagtgttgggccccca
cccagctatgatcgtggcagaggtcacgcttcttatggagccattcccatggtaccacca
catacagcggttggtgtaagagctggaggaggtagtgttggttttagtgggtatccttct
gttgatcacggtgttgggagagggtataatgtgagctatggtggtgatttttctgacagg
ggcaggggcggagttggaggtcgaggattcaacaacagtggatttggagataggagaggt
ggcggaagaagccatgacagtgggaggggagccagtgtctctggaaggggttttaatcca
agtcatagtaggggtaggaatgttgatgaatttggcagtgggcgtggtgctatcaggggt
ggttttgatggaggccgtggtgcaagagggggtaggcccaggggtgatgacttagattat
gttaatcttccagagcaagactttagaggtttagttgggtttaaaaaggatttttatatg
gaaaacccatctgtcagggcaatgaccgagctagaagtttcgatgtatcgtgcaaggcgg
gagattactgttgaaggtcatgatgttcccaggccaattagaatttttcaagaagcaaat
tttcctgattattacctggaggtcatcgctagattgggctttgttgagccaactcctatt
caatcccaaggatggccgatggctttaaggggtcgagatctaataggtatcgctgagact
ggttctggaaagactttggcatatttgcttcctgcttttgttcatgttagtgctcaaccc
aggctgagacaaggtgagggtccagttgtactagtactagcaccgactagagaattggct
gttcagattcaagaagaagctgtaaaatttacttcatatgcaaacataaggagtacttgc
atctatggtggtgccccaaaaggtccacaagttcgtgaccttaaaagaggagttgaaatt
gtcgttgctacgccgggcagattgatagatatgctagaagcgcaacatactaacttgaaa
agagtgacatacctcgtactggacgaggctgatcgtatgctagatatgggatttgaacct
caaatcagaaaaattgtttctcagatacgtcctgacaggcaaacattgtactggagtgcc
acatggccaagggaggtagagactttggcaagacagttcctgcgcaatgcatacaaggtt
atcatcgggtctctgcatctgaaagcgaaccaatctatacaccaagttgttgaagttatg
agtgatttggaaaagtataacaggctgatcaaattgctaaaagacttgatggatggaagt
aagatattaatttttgtagagacaaagaaaggttgtgatcaagtcacaaaacagatgaga
atggatggatggccagctttatctatccatggtgacaagacccaggatgaaagggattgg
gtcctggctgagtttaaaagtggcagaaatccgataatggttgccactgatgtggcagct
cgtggtcttgatgtgaaggacataaaatgtgtcataaattatgatttcccaacatctcta
gaggattatgtccacaggatcggtcgaaccggtcgtgcaggagctaggggcatggctttt
acatttttcactcatggaaatgccaagcatgcaagagaacttataaaaatcctgcagcaa
gcagggcaagttgttcctcctcaactctctgctatggcacgaaccggtggctctaacatg
ggggcttctggaagcaacatccgaggacgcggatggggacgtggtcgaggaggaggagct
tttggcaaccgtggtgcggtttctggaaccaacactattcctcttggtggcaagaggcca
tggtag
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