Primulina eburnea: 140819519
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Entry
140819519 CDS
T11060
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140819519
Enzymes [BR:
pebu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140819519
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140819519
NCBI-ProteinID:
XP_073035745
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All DBs
Position
18:28367522..28369846
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AA seq
411 aa
AA seq
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MASVFSSVTFPFLLLFFCGLLPCLIANASSPAVQDPELVVQEVHRSLNESRRKLGFLSCN
TGNPIDDCWRCDSNWEKNRQKLADCSIGFGKNAIGGRDGEIYVVTDPSDDDAVNPKPGTL
RYAVIQEEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIANGPCITIQYVTNIIIH
GINIHDCKQGGNANVRDSTKHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
GSTAITISNNYLTHHNKVMLMGHSDSNTQDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHV
VNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNDRFNKEVTKHEDAPESEWKNWNWRTEGD
LMLNGAFFTTSGAGASSSYAKASSLGARPSSLISSITSSAGAMSCKKGSRC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggttttctcttcagtcacattcccatttctcctcctcttcttctgtggactt
ctcccgtgtctcattgccaatgcatcctccccggctgtgcaagaccctgagttggtagtc
caggaagtgcacaggagtttgaatgaatcgagaaggaaactggggttcttgtcgtgcaac
acgggtaacccgatcgacgactgctggcgttgcgactcgaattgggagaagaaccgtcag
aagctggcagactgtagtatcgggttcggcaaaaacgccatcggcggaagagatggggag
atttacgtcgtgacggatccgagcgacgacgacgcggtcaatccgaaacccgggacgctc
cgctacgccgtcattcaagaagagccgttgtggatcatatttgcccgggacatggtcatc
aaattgaaggaggagctgataatgaactcgttcaagaccatcgatggcaggggagctagc
gtgcacattgctaacggcccttgcatcactatacaatacgtgacgaatatcatcattcat
gggatcaatatacatgactgcaagcaaggggggaatgctaatgtgagggactccaccaag
cactacgggtggaggaccatatcggacggtgacggcgtgtccattttcggcggcagccac
gtttgggtcgaccattgctcgttgtcgaattgtaacgacgggctcatcgacgccatacac
gggtcgaccgcgattaccatctcgaacaactacttgactcatcacaacaaggtcatgctt
atggggcatagtgattccaacacacaagataagaatatgcaagttactattgcctttaat
cactttggggaaggacttgttcaaagaatgccaagatgtagacttggatatttccatgtg
gtgaacaatgactacacccattgggagatgtatgcaattggagggagtgcagcccctacc
ataaatagccagggcaatagatttctagcccctaatgacagattcaacaaggaggtgacc
aagcatgaggatgcaccggagagcgaatggaagaattggaattggaggaccgaaggagac
ttaatgttgaacggcgcgttctttacgacttccggtgccggagcatcctcgagctatgcc
aaggcctcgagtttaggcgctaggccttcttccttgataagctccatcacttccagtgcc
ggcgccatgagctgtaaaaagggatcgcggtgttag
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