Primulina eburnea: 140819743
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Entry
140819743 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: chaperonin 60 subunit alpha 2, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140819743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140819743
03110 Chaperones and folding catalysts [BR:
pebu03110
]
140819743
03029 Mitochondrial biogenesis [BR:
pebu03029
]
140819743
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pebu04147
]
140819743
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
140819743
Messenger RNA biogenesis [BR:
pebu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
140819743
Chaperones and folding catalysts [BR:
pebu03110
]
Heat shock proteins
HSP60 / Chaperonin
140819743
Mitochondrial biogenesis [BR:
pebu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
140819743
Exosome [BR:
pebu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140819743
Exosomal proteins of other body fluids (saliva and urine)
140819743
Exosomal proteins of breast cancer cells
140819743
Exosomal proteins of colorectal cancer cells
140819743
Exosomal proteins of bladder cancer cells
140819743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TAL_FSA
Motif
Other DBs
NCBI-GeneID:
140819743
NCBI-ProteinID:
XP_073036030
LinkDB
All DBs
Position
18:complement(30652457..30656268)
Genome browser
AA seq
584 aa
AA seq
DB search
MLLTFSSQLVLHNHPSFTGVDGKSNSCWLWSRHNVKQKPLVVKAGPKRVAFDRECREALL
SGINKLADAVSVTLGPKGRNVILSESETLKVVNDGVTIAKSIELSDPIENIGALLLQEVA
IKTNGSSGDGTTTSIILAREMIKSGLLAITSGANPVALRKGMEKTVKELVKSLKENSYAI
SRSEDIEAVASISAGNDEIIGKLIAEAMDKIGPDGLISVESSSSSDTSVIVEEGMKIDKG
YMSPHFITNKDKSIVEFDNAKILVTDLKISDVREIVPLLEKATQLSVPLLIIAEDISRQV
LEILVVNKMQGVLNAATVKCPGFGEAKKAILQDIALMTGADFISGDLGLNLESATSDQLG
VAQKVTITSNCTTIIADPSTKAEIQARILQIKKDLAETDSKYMAEKLSARIAKLCGGVAI
IKVGAHTELELEDRKLRIEDAKSATFAAMAEGVVPGGGATYVHLSRKIPILKKVFEDPEE
KIGADIVGMALLAPAKFIAANAGVDGDVVVEKILSSDSRVGYNAMNGRYEDLIAAGVIDP
CRVSRCALQNAVSIAGMILTTQAILVEKIRKTKPIVPHVPGISP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttacgttttcttcgcagctagtcttgcacaatcatccttcgtttactggagtc
gatggaaaatcaaattcatgctggttgtggagcagacacaatgtgaaacagaagcctttg
gtggtgaaggcaggtccaaagagagtagctttcgacagagagtgtagagaagctttgctt
tcgggcatcaataagcttgctgatgctgtatcggtgaccctgggacctaaagggcgaaat
gtgatcctttcagaatctgagacacttaaagttgttaacgacggtgttactattgccaaa
tccatagaactctctgaccctattgagaatataggagcattgctcctccaagaggttgct
attaaaacaaacggttcatctggggatggcacaacgacttcaattatactggctcgagaa
atgattaaatctgggcttctagccatcacttctggtgccaaccctgtcgctttgagaaaa
ggaatggagaaaacagtgaaagaattggttaaaagtttgaaggaaaatagttatgctata
agtcgaagtgaagacattgaagctgtagcttcaatatctgcgggaaatgatgaaattatt
gggaagttaattgctgaagcgatggataaaattggtcctgatggattaatatctgttgaa
tcttcttcatcatccgacacatcagtgatagttgaagaaggaatgaagatagacaaaggt
tacatgtctcctcatttcatcaccaacaaggacaaatctatagttgagtttgacaatgct
aaaattcttgtgactgatctaaagatatctgatgtgagagagattgttcctttgttggaa
aaggccacacagttgagtgtccctttgctgataattgctgaagacatttctcgacaagtg
ctggaaattctagtggtcaataaaatgcaaggtgtgcttaatgctgctacggtaaaatgt
cctggttttggagaagcaaaaaaagctattttgcaagatatcgcacttatgacaggagcc
gattttatctctggagatttgggccttaatcttgaatctgcaacttccgatcagcttgga
gtcgcacaaaaagtaaccataacgagcaattgcacaactataattgccgacccttctact
aaagctgaaatacaggcaagaattttacagataaagaaggatttagctgagactgatagc
aaatatatggcagaaaaactctctgcaagaattgcaaagctctgtggtggggtcgcaatt
attaaggtaggagctcatacggagttggaacttgaagatcggaaactaagaattgaggat
gcaaaaagtgctacttttgctgccatggctgaaggcgtggtgcctggtggtggagcaacc
tatgtacatctctctagaaaaatacctatactgaagaaggtttttgaagatccagaagag
aaaattggtgcagacattgttggaatggcccttcttgcacctgcaaaattcatcgcagca
aatgcaggggtcgatggagatgtagttgtagagaaaattctatcttctgactcgagagta
gggtataatgcgatgaacgggagatatgaagatctgatagctgctggagttattgatcct
tgccgtgtttcaagatgtgcacttcagaatgctgtctcaattgctggtatgatccttacc
actcaagccattctggtggagaaaataaggaaaacaaagccaattgtccctcatgtacct
ggaatatcgccttaa
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