KEGG   Primulina eburnea: 140820035
Entry
140820035         CDS       T11060                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pebu  Primulina eburnea
Pathway
pebu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140820035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pebu03019]
    140820035
Messenger RNA biogenesis [BR:pebu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     140820035
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     140820035
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 140820035
NCBI-ProteinID: XP_073036434
LinkDB
Position
18:complement(32815349..32817600)
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGIFRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLDKEELPSRMTCVSPAEIRRAKKAERDSSELKGMMKQ
RMDFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggcccggaagatatttacctctccacatctcttgccagctatcttgac
aagaaacttcttgtattacttcgagatgggaggaaactattagggatttttcgttccttt
gatcaatttgctaatgcggttttggaaggcgcatgtgagcgtgttattgttggcgatctg
tattgtgacattccattaggtctgtatgtgattcggggagaaaatgttgtgttaattggg
gagctggacctggacaaagaggaacttccttcacgcatgacttgtgtttcacctgcagag
ataaggagggcaaagaaagcagaaagggattcttcagagcttaaggggatgatgaaacaa
aggatggattttcttgatatggattga

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