Primulina eburnea: 140820049
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Entry
140820049 CDS
T11060
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140820049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140820049
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140820049
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140820049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
140820049
NCBI-ProteinID:
XP_073036462
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All DBs
Position
18:31816913..31817719
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AA seq
268 aa
AA seq
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MSLLPESVCIQIRNVWEDNLEEEFTFIRNIIDDYPYVAMDTEFPGIICQPTKEFSDPRDY
QYAKLKLNVDLLKLIQLGLTLSDAKGNLPHCDTDKFCVWQFNFREFNPEHDKFVIESLAL
LQNSGIRFRKNNEKGISARRFGELLMSSGVVLNDSVCWVTFHSGYDFGYLLKLLTCRDLP
DTQAGFFELIRIFCPVLYDVKHLMKFCGMHGGLNKLARFLGVQRVGISHQAGSDSLVTAR
AFKNLKDNNFGGKVDRYAGVLYGLGVDN
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgcccgaaagcgtctgcattcaaatcaggaacgtttgggaggacaatttg
gaggaagaattcacgtttattcgaaatatcatcgatgattacccctacgttgcaatggat
acagagttcccgggcattatctgccaacccacaaaagagttcagtgacccccgtgattac
cagtacgcaaaattgaaacttaatgttgatcttttgaagctgattcaattaggtctcact
ttatccgacgccaagggaaatttaccccactgcgacactgataagttctgtgtctggcag
ttcaactttcgagaattcaatccggaacatgataagtttgttatcgaatcactggcgttg
cttcaaaatagcggcattcggtttagaaaaaataacgaaaagggtatcagcgccaggcga
ttcggggagctcttgatgtcgtctggggttgttttgaatgacagcgtctgctgggttaca
ttccacagtggatacgatttcgggtacttgctcaagctgttaacttgccgggatttgcct
gatacacaggctggattcttcgaattgatccgtatattttgtccggtgctgtacgatgtc
aaacatttgatgaagttttgtggtatgcacggtggattaaacaagctggccaggttcttg
ggggtgcagagggtcgggattagtcaccaggccggatcggatagcttggttacggctcgt
gcattcaagaatttgaaggataataactttggaggcaaagtggacagatatgctggggtt
ttgtatggtttaggtgttgataattga
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