Primulina eburnea: 140821622
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Entry
140821622 CDS
T11060
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Module
pebu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140821622
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140821622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
CFAP300
PPV_E2_C
Motif
Other DBs
NCBI-GeneID:
140821622
NCBI-ProteinID:
XP_073038261
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MGLAVSISKCFKVTVTGITIQNSPRMHIYFEDSQQVKVFNFTVSSPGNSPNTDGIHLSRS
QHVEIHDSTLACGDDCISIQTGCSDIKVYQVNCGPGHGYSIGSLGRYETEALVSDIAIYD
SNVQNSMTGVRIKTWEGGSGSVRNVTFSNITMSDVKTPITIDQHYCEGHKACKDDTSAVA
ITGITYQNITGTYTHTSVSLLCSEHEPCKNLIVAGVDLKPSKTKGSHEGPYCSNAYGEVL
TETLPSLRNCLQSL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgggactcgcagtgagtatttcgaaatgtttcaaggtgacagtaacaggaatcacaata
caaaacagtcctcgtatgcacatttattttgaggactcccaacaagttaaagtgttcaat
ttcacagtctcctctcctggaaatagccccaacacagatgggattcacctctcacgcagc
caacatgttgaaattcacgactccactctcgcttgtggagatgattgtatttcgatacag
accgggtgttccgatataaaagtataccaggtgaattgtgggcctgggcatggatacagc
atcgggagtctaggacgttatgagactgaagctctggtttcagacatcgcaatttatgat
tcaaatgtacaaaactcgatgacgggagtaaggataaagacttgggagggtggctcaggg
tcggtgcgtaatgttacattctcgaacattacgatgtcagatgttaaaactccgatcacc
atagaccaacactactgtgaaggacacaaggcttgcaaggatgacacctcagcagtagcg
ataactggcataacctatcagaatataacagggacatatacccacacatccgtttctctt
ctgtgcagcgagcacgagccatgcaaaaatttaattgtggcaggtgttgacctaaagcct
tcaaaaaccaagggaagccatgaagggccatattgttcgaacgcatatggagaagtactt
accgaaacattgccatctttacgtaattgtttgcagtctctttga
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