Primulina eburnea: 140821822
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Entry
140821822 CDS
T11060
Name
(RefSeq) phytochrome A-like
KO
K12120
phytochrome A
Organism
pebu Primulina eburnea
Pathway
pebu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
140821822
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_4
HATPase_c
HisKA
PAS_9
PAS_8
Motif
Other DBs
NCBI-GeneID:
140821822
NCBI-ProteinID:
XP_073038546
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All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MTSSHPGQSSTSSRSRHSTRMIAQTSIDAKIHTDFEESGSSFDYSSSVRTTSAARVDRGP
RPDKITTAYLHQIQKGKLIQPFGCLLALDDKSLLVIAYSENAPEMLTMASHAVPSVGEHP
VLGIGTDVKTIFTGPSAAALHKALGFGEVSLLNPILIHCKTSGKPFYAIIHRVTGGFIID
FEPVNGHEVPMTAAGALQSYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMM
YKFHDDHHGEVYTEIIKPGLEAYLGLHYPATDIPQAARFLFMKNKVRMICDCRARPLKVL
QDEKLPFDLTLCGSTLRAPHGCHSQYMENMNSVASLVMSVVVNEEVEEGSNSSQPQKEKR
LWGLVVCHHSTPRFIPFPLRYACEFLAQVFSIHVNKELELENQMLEKNILRTQTLLCDML
LRDAPLGIVSQSPNIMDLVKCDGAALLYKNQNYSLGLTPHDSQIRDIVSWLDEYHRDSTG
LSTDSLYDANFPGALALGDTICGMAAVKITDKDWLFWFRSHTAAEIRWGGARNEPYAEDD
SRKLHPRSSFSAFLEVVKERSLPWKDYEMDAIHSLQLILRNAFKDIEATDLGTTAIHTRL
NDMRIDGMQELEAVTSEMVRLIETASVPILAVDVDGRVNGWNTKIADITGLPVDEAIGRH
FLALVEDSSADAVNKMLESALQGNEERNVQFEIKRHGSSEESGPISLVVNACASRDVREN
VVGVCFIAQDVTAQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGSDEFGWCSEWNTAMTK
LTGWPRDAVINKMLLGEVFGTHVACCRFKNQEAYVNLGIVLNNAAVGQESEKVPFGFFSR
SGKYVECLLCAIKKLDGDGEVTGVFCFLQLASPELQQALHIQRITEQTSMKRLRLLAYIR
REIKNPLSGIIFSRKMMEGTVLDDEQKSLLRTSVHCQRQLNKILDDTDLDHIIEGYMDLE
MVEFKLHEVLIASISQVMMKSNAKGVKIVDNLAPNLSNETLYGDSVRLQQVLAAFLLVSV
TVIPSGGQLGVAASLKKDSIGESVQLGHLEFRITHSGGGVPQGLLNQMFGDEQEASEEGI
SLFICRKLVKLMNGEVQYLREAEQSTFIISVELAISNHQT
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcttcacatcctggtcaatcgtctacaagttcaaggtcaagacatagcactagg
atgattgctcagacctcaatagacgcaaaaatccacacagacttcgaggaatcaggtagt
tcatttgactattcaagctcagtgcgtacaacaagtgccgcccgagtagatcgggggcct
aggcctgacaaaatcaccacggcttacctacatcaaatacagaaaggaaagctgattcag
ccatttgggtgtttgttggcgcttgatgacaagtcactccttgtgattgcctatagtgaa
aatgctcccgaaatgcttacaatggcgagtcatgctgttccaagtgttggagagcaccca
gtacttggcatcggaactgatgtcaaaaccattttcactggtcctagtgctgctgcttta
cataaggcattaggatttggtgaggtttctcttttaaacccaatcttgatacactgcaaa
acttctggaaagccgttttatgctataatccacagagttacaggtggttttattatcgac
ttcgagcctgtgaatggtcatgaggtcccgatgactgctgctggtgccttacaatcttat
aaacttgctgccaaagccattacgagattgcagtcattacctagtgggaacatggaaagg
ctctgtgatacaatggtgcaagaggtttttgaactcacgggctatgaccgagtaatgatg
tacaagtttcatgatgatcatcatggggaggtgtacaccgagatcataaagccggggctt
gaggcttatttgggcttgcattatccggccacagatatccctcaagctgcccgattttta
ttcatgaagaacaaggtcaggatgatctgcgactgtagagcacgtcctcttaaggttctt
caagacgagaagcttccttttgatctcacgttatgtggctcgacactcagagctcctcat
ggttgccattcacaatacatggaaaacatgaattcagttgcatcattggtgatgtcggtt
gttgttaatgaggaagttgaagaaggctccaattcctcgcagccacaaaaggaaaaacgg
ctttggggacttgtggtttgccatcattcaaccccaagattcatcccttttcctctccgt
tatgcatgcgaatttcttgcccaggtgttttccattcatgtcaacaaagaattagaattg
gaaaatcagatgctcgagaagaatattctgcgaactcaaaccctcttgtgtgatatgctg
ttgcgagatgcccctttaggcatcgtctcacaaagcccaaacataatggatctcgtgaaa
tgtgatggggctgctctactatataagaatcaaaattatagcttaggattaaccccacac
gactctcagattcgtgacatagtttcttggctagacgagtatcatcgagattccacaggt
ttgagtacagatagcttatatgacgccaattttcctggagcgcttgctcttggtgacacc
atctgtggaatggcggctgtcaagataactgataaggactggcttttctggttcaggtcg
cacactgctgcagaaattcgttggggtggagccaggaatgaaccatatgcagaggatgat
agcaggaagttgcatccaaggtcatcttttagcgcattcttagaggttgtcaaggaacga
agtttaccttggaaggactacgagatggatgccatccactctttgcagcttattctacga
aacgcattcaaggatatcgaggctacagatttgggaacaacggcgattcatacaagactt
aatgacatgcgaattgatggaatgcaggagcttgaagcagtgacatctgagatggtccga
ctgattgaaaccgcatctgtgcctatcttggcagttgatgtggatgggcgggttaatgga
tggaatacaaaaattgctgatataactggtcttcctgttgacgaagcaattggcaggcat
tttcttgcactggtagaagattcttcagccgatgcagtgaataagatgttggaatcggca
cttcaagggaatgaagaacgaaatgttcagtttgagatcaaacgacacgggtcaagtgaa
gagtctggtcccatcagcttagttgtaaacgcttgtgcaagcagagatgttcgagaaaat
gttgtgggagtgtgttttattgctcaggatgtaactgcacagaaaagtatgatggacaaa
ttcacaagaattgaaggagattacagagctatagtacaaaatcctaatccacttatccca
cctatatttggctcagatgaatttggctggtgttccgagtggaatacagctatgactaaa
ttaactggatggcctagagacgctgtgatcaataaaatgcttctcggtgaggtctttgga
acccacgtagcttgttgccgattcaagaatcaagaggcttatgtgaaccttggtattgta
ctcaacaacgctgcagtcggtcaagaatctgaaaaggtaccctttggttttttctcgagg
agtgggaagtatgtggaatgcctcctttgtgcgataaaaaagttggatggagatggtgaa
gtaactggcgtcttctgcttcctgcagctggcaagtccagaactccaacaggcacttcac
attcaacgcataacagaacaaacgtcaatgaagagattgaggctcttggcatatatcaga
agggagattaagaatcccctatctggaattatattttcacgaaagatgatggaaggaact
gtcctggatgatgagcagaaaagccttcttcgcactagtgttcattgccaacggcagcta
aataaaattctcgatgacacagatcttgatcatataattgaagggtacatggatctggag
atggtagagtttaagctgcatgaggtgttgatagcttccatcagtcaagtcatgatgaag
agcaatgcaaagggtgtgaaaatagttgataatttagctccaaatctctcaaatgaaacc
ctatatggagacagtgtgaggcttcagcaagtcctagcggctttcttgcttgtatcagtt
actgtcattccgagtggaggccagcttggtgttgcagcttctttgaaaaaagattctata
ggggaatctgttcagcttggtcacttagaattcaggataacacatagtggcggaggagtg
cctcaagggttattgaaccaaatgtttggtgatgaacaggaagcttctgaagaaggaatt
agcctttttatctgccgtaaactggtgaagcttatgaatggtgaggttcagtatttaagg
gaggcggaacaatccactttcattatatccgttgaactagcaatctctaaccaccaaaca
tga
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