Primulina eburnea: 140822010
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Entry
140822010 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pebu01009
]
140822010
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140822010
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
140822010
Protein phosphatases and associated proteins [BR:
pebu01009
]
HAD phosphatases
Fcp/Scp phosphatases
140822010
Transcription machinery [BR:
pebu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140822010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Dicer_dsRBD
Cwc21_C
Motif
Other DBs
NCBI-GeneID:
140822010
NCBI-ProteinID:
XP_073038823
LinkDB
All DBs
Position
2:4665444..4687835
Genome browser
AA seq
956 aa
AA seq
DB search
MYSKSVLVYLGDRVLGEVELHPQNGIVFGEEFREIRISHYSQPSERCPPLAVLHTVSATG
ACFKLESSLKSQESPLSVLHATCLRENKTAVMSIGGGEIHLVAMHSRKCEGQGPCFWGFN
VSPGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKISSESDPHRVSGM
VAEVKRYQDDKNILKQYAESDQVIDNGKVIKSQPEMVPALSDNHEPILRPIIRLQEKSIV
LTRINPLIRDTSVLVRLRPAWEDLRTYLTARGRKRFEVFVCTMAERDYALEMWRLLDPES
NLINSNELLDRIVCVKSGSRKSLFNVFHDGSCHPKMALVIDDRLKVWDEKDQPRVHIVPA
FAPYYAPQAEANNTVPVLCVARNVACNVRGGFFKEFDDGLLQQIAEVAYEDDIKNVAFPP
DVSNYLISEDDPSTSNGNKDLHVFDGMADIGVERRLKEAIPASSTGPPPTKTLDPRIPPA
LQYTVPSTSFSVPPSTIQGLPVPFTNQQSPQVTSLLKSPLTQIGPAEPTFHISPVTEEGE
VPESELDPDTRRRLLILQHGQDMRGHTPSESQFPARPPMQVSVPAVQPRGWFPGEEEMSP
GHLNQVAPHKEFPLNAESLPIDHRVHHPPFLHKVEPSIPPGRVLENKRLSQEVLPRDDLL
RLNQQLPGFHSFSDEGGPRRPQPSLVNKDLDLEAGQIDPYPETSTGALQDIALKCGTKVE
FNQALSPILELQFSVEVMFAGQKIGEGFGRTRREAQRQATEVSLMNLADKYLSNLEPEFS
YTTGNDGRFANPNDSGSXCDVNSFLYQSHHEELVPFSTSVSPRIPDARVKNSKKSMGSIA
ALNEFSMKEGLGVAFQTLPQFSANPSLKNEVYAQVEINGQLMGKGIGRTWDEAKSQAAEK
ALDALYSMVGQFPHRRHGSPSSLQGLSNKRLKSDFSRAVQRIPSSNRYPKNASPIP
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtaaatcggtgctggtctatttaggagacagggtgctgggagaagtggagttg
caccctcaaaatggaattgtatttggagaggaatttagggaaattcggatatcgcactat
tcacaacccagtgagaggtgcccgccactcgccgtgcttcacactgtatccgcaacggga
gcatgcttcaaattggaatcttctttgaagtctcaggaatcgccgctttctgtcttacat
gctacatgtctcagagaaaacaagactgctgtaatgtcaattggaggaggggaaattcat
ttagttgccatgcattctaggaagtgtgaagggcagggcccatgcttttggggattcaat
gtttctccgggactttacagttcttgtcttgtcatgctgaatcttagatgtcttggcata
gtatttgatcttgatgaaactctcatagttgcaaacacaatgcgctcatttgaggacaga
atagaggcgctgcagagaaaaataagctctgagtctgatccgcaccgtgtttctggcatg
gttgcagaggtcaaacgttatcaggatgataaaaatattttgaagcaatatgcagaaagt
gatcaggtgattgataatgggaaggttatcaaatcacagcctgagatggttccagcattg
tcagacaatcatgagcctatcctccgtccaatcatacgactacaagaaaagagcatcgtt
ctgactcgcattaatccactgattcgagacaccagtgtcctagtgagattaagacctgct
tgggaggatcttagaacctatttaactgctagaggtcgaaagcggtttgaggtttttgtc
tgtactatggctgaaagagactacgcattagaaatgtggaggcttcttgacccagagtca
aatttgataaactctaatgagctcttggatcgaattgtttgcgtcaagtctggttctagg
aaatccctatttaatgtctttcacgatggaagttgccatcctaagatggcattggtgatt
gatgaccgtttaaaagtgtgggatgagaaagatcagcctcgagtgcatatagttcctgca
tttgctccgtattatgcgcctcaagctgaagccaacaacaccgtacccgtgctttgcgtt
gcaagaaatgtagcttgcaatgttagaggtggattcttcaaagaatttgatgatggtctc
ttgcaacaaattgctgaagttgcatatgaagatgatattaaaaatgtggctttcccaccc
gatgtgagcaactacctgatatcagaggatgatccttcaacctctaatggaaacaaggat
ttacatgtttttgatggaatggctgatattggggtggaaaggaggctaaaggaggcaatt
cctgcttcttcaactggccctccaccgacaaaaactttggacccaagaattcctccggct
ctccagtacacagtaccatcgacttctttttcagtccctccatcaacaattcaagggctg
ccagtgccttttaccaatcagcaatcacctcaagtgacgtctttgcttaaatcaccatta
actcaaattgggccagcagaaccgacttttcacatttctcctgtaacggaagagggtgag
gtaccggagtctgaattagatcctgatacaaggaggagactgctcatcttgcaacatggt
caagacatgagaggccacactccatctgaatctcagtttcctgcccgacctcccatgcaa
gtctctgttccagcagttcaaccacgtggttggtttccaggtgaagaggagatgagccca
ggacaccttaaccaagttgcgccacataaggagtttcctttgaatgcagagtctcttcct
attgaccatcgggttcatcatccgccttttctacacaaagtggagccttctattccacct
ggtagagttcttgaaaacaaaaggttgtcccaggaggtgcttccgagggatgacctgtta
aggttaaaccaacagctgcctggttttcattccttttctgatgagggtggtcctcgaagg
cctcaaccatctttagtaaacaaggatctagatcttgaagcaggacaaattgacccctat
cctgaaacgtctaccggagctttacaggatattgcattgaaatgtggaacaaaggtcgag
ttcaatcaagctctatcaccgatcttggaactgcaattctctgtggaggttatgtttgca
gggcagaaaattggtgaagggtttggcagaacaagaagggaagcacagcgtcaggccact
gaagtatctcttatgaacttggctgataaatatttatcaaatcttgaacctgagtttagc
tacacaactgggaacgatggtaggtttgctaatcctaatgatagtggttctntttgtgat
gttaattcatttttatatcagtcacaccatgaggagttggtacctttttcaacatcagtg
tcaccaaggattcctgatgcaagagtcaagaactccaagaagtcaatgggatcaatagct
gcacttaacgaatttagcatgaaggagggacttggtgtagcatttcaaaccctacctcaa
ttttcagctaaccctagcctaaaaaacgaagtgtacgctcaggttgaaattaatggacag
ttgatgggcaagggaattggtcgaacatgggatgaggctaaatcacaggctgctgaaaag
gcacttgatgccttgtattccatggttggtcagtttcctcacagacgccatggttctcca
tcatctttgcagggcttgtcaaacaaaaggttaaaatcagatttctctagagctgtgcaa
agaataccatcctctaaccgataccctaagaatgcatctcccataccatga
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