Primulina eburnea: 140822123
Help
Entry
140822123 CDS
T11060
Name
(RefSeq) uncharacterized protein isoform X1
KO
K24155
rabconnectin-3a
Organism
pebu Primulina eburnea
Pathway
pebu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
140822123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pebu04131
]
140822123
Membrane trafficking [BR:
pebu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
140822123
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
140822123
RAVE complex
140822123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
140822123
NCBI-ProteinID:
XP_073038965
LinkDB
All DBs
Position
Unknown
AA seq
2541 aa
AA seq
DB search
MEHHQSFHPSSNQISSAGKMPEVTSKSPAAADIASYLPLKLIKSEIVPPAPSRPKHGSEH
VIDWLLDFAGYSWIVYGASSLLVISHFPNPLSQAEAKIGPVFRQVLELSRSRGSDVCVSG
VSWSPAEPCVGELGAAIDECIQLFSYNSDDTSSSSFCWSQTAVLSQTTKVEAIQWTGSGD
GIIAVGIDVMFWRRNVKSWEIAWKFRPKVPQTLISTTWSLQGLSATAPYRLNNGVASSLT
NEARNYGSPANNSVLICQGDGRSRYMQAELHHPMPVGMIQWRPSTGKPLSRHVVHAPRSV
LLTCSLDGAVRLWSEIDAGRIRRSGKDSNDHRSPRLSFCVIGVIEVYQTLNGSLGSDIFV
FWATEVESIKLLYEEACYSCLNDSQYDDASRCEWLIGLGPDRATTLWAVHCLDDFAPVRF
PRITLWKKQELVSSEMETSQVLVHKVFMMRNLVSGPPVTCSLVELSPCNSFTWIQLYFQR
PTREGKSANGYNTENPTPSESKGVMKADGHTGKILQIAVHPSISGVELAASLDRHGMLLF
WSFSTFFSSHIGLPTSTPSWKLYGKISFSGCSHSPNYTCLCWAPAILSEDRALLLGHSDG
IDCFILQTSKGDEHNLSFHKLCSIPFGACGHQQRVSRICSIPLPPDCDETVSSCKFLLVA
LWMDRFQAQSWEITIHYNGSCRCCCDDHLQIFESDFAGKKFIVSVEPCSSVIPAPHDDDQ
VTSYSVACPNDLIVSLEQKLSSDNGRGGCYAYHMITGCMNGSLKLWRSLPTRSSSSGASW
DLVGVLSSGQGSITALTPSPCCRKIATSSPSDQQNCSSILCIWECMHVQNAGIFLLEDKL
CLDGEVVALSWLMMGNGQLLLGVCLQSEVRVYALRRCGHQSFLKSGKPMEKNIWHCIAVH
SASPAIHNFLWGPRGTIIVVHDKYFSIFSQFLLLADEDFLSKCCPKFCQDGPFCCNGGIR
KLMLSTTFTDSKEPSMKINGQYQFSSEVNMRDDPKSYVQNCEQMHDILTKIWFWSMSEIA
ENMGGSLPLYHPETLLINISSGNFKRAFVALRHLVKDIASNGSSKKRYGTKVPRNMISPL
PMSNYLEGLPTSSSNDNLFQWSSSQPRIGLSQFTSGWGHNDPHIGLTSSSQRSEFVGFIE
ALDWLHRAGCMTNIEMMQAISLVDLLQEVSDPHSTSAYGSLDEPGRRFWVAVRFQRLFFS
RRFNRLPLVEELDVSSELIGWAFHSDCHENLFNSLLSAEPSWEEMRSIGVGFWYSNVTQL
RLKMERLARQQYMRNKDPKACSLLYIALNRIQVLAGLFRISKDDKDKPLATFLLRNFQED
NNKAAALKNAYVLMGKHQLELAVAFFLLGGDLSSAVSVCAKNLGDEQLALVICRLIEGYG
GPSEHKLISKFLLPSALSKDNNWMASFLEWVLGNHSQSFLRILGVEMSSESNSSLLSSLH
APFLDPSISQYCMMLATKTVMKNAIGEYRAAVLSQWAVLMNVTSLSRCGLPLEALECHSS
SISFFGSLGQGSTMQSPDHNVLVEMLKPPADKHFLNWISKETSHQIMSHSKLNLAMQYLS
NLLTEHPSSADIETASFGMFTNYDPVDQEFEKSLNEFHSNLTAAIACFQQKFFLIPLHLI
FMAALFFHHKGLEFIGNNILHEYMLKVQSDDKCHADNLFSHPIPSDLLLKAAEEFSCIFA
KYVLFSCVNCHHSSYLDNDSIACEARFCWLAAWGFSNQGITWSFGCLTAMLRLILRPYTK
EFEMMLFHILALVKYHVFFSSAWLQRNLNALLVIVKPILTPLMRGNVSNELTVEDLNALL
SEIVEKLTHESTYVQLPTCVEIDGRKLEQNVGSVPSAPEAKSWELMSGSLWVHMVKFLEH
QLNTLPVILDGICPSPTPSLSIPDCKKLPLEMGLVSSTLVEFLKLTKAGVSFYCSRQFVV
NLLQEVDLPNKLILSYLENGFPLPELRDKYNNKSLENTEFLDSGSELSALKKLCVICADR
RITHGAFEQEYCNWLPYVKQKSFGGWGETYINISREYESEETSFKKDRLDSPSHAVGSPL
ACLSPDDHPFKSFGGNDVFDMKKTMPFHNPKEIYKRNGELLEALCINSVDNCQGAVASNR
KGILFFNWEDGLLHMDKSDSLWEEADWPHNGWAGSESTPVPTCVSPGVGLGSTKDTHLGL
GGATIGAAAVPRAGWDLTGGGAFGIPGYAGVGASGLGWGVQDGFDEFVDPPATVDNVRSR
ALASHPSRPFFMVGSSNTHIYLWEFGEERAIATYGVLPAANVPPPYALASVSAVRFDNCG
HRFATAALDGTVCTWQLEVGGQSNIRPTESSACFSNHTSDVTYVTASGSIIAASGYSSNG
VNVVVWDTLAPPATSQASIMCHEGGARSLSVFDNDIGSGSISPLILTGGKEGDVGLHDFR
YIATGKTKRHKHFDTGEHNINASSSGYMQNKTGDQNRNGMLWYIPKAHSGSVTKITTIPN
TSFFLTGSKDGDVKLWDAKMAKLVFHWPRLHERHTFLQPSSRGFGGVVRAAVTDIQVVPQ
GFLSCGGDGLVKFIRFHNFRT
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcaccagtccttccatccaagctccaatcaaatctcgtccgccgggaaaatg
ccggaggttacttccaaatctcccgctgcggcggacatcgcctcgtatcttcctctcaaa
ttgatcaaatcggagatcgttcctcctgccccgtcccgtcccaaacacggatctgaacat
gtgatcgactggctgctggacttcgctggatactcatggattgtctatggggcttcatct
cttcttgttatttctcacttcccaaatcctttgtctcaggccgaagcgaagatcggtcct
gttttccggcaagttctcgagctgtcgcgaagccgtggtagcgacgtttgcgtctcgggc
gtctcgtggtcgcctgcagagccttgtgttggtgaacttggggcggctatagatgaatgt
atccagttgttctcatataattcagatgacacttcgagcagttctttttgttggagtcag
actgcagttctttctcaaacaacgaaggtggaggccatccaatggacggggtctggggat
ggaatcattgcagtaggcattgatgtgatgttctggagaaggaatgtgaaatcctgggaa
atagcttggaaatttagacccaaagtgcctcaaacgctgatatctaccacttggtcgctt
caaggattatcagcaacagcaccatacagactgaacaatggagttgcatcatctctgacc
aatgaagcaagaaattatggttctccggcaaacaattcggttttaatttgtcaaggtgat
ggacgttccagatatatgcaagctgagttgcatcacccaatgcctgttgggatgatacaa
tggaggccatcaacaggaaaaccattaagtagacatgttgtacatgcaccgaggtcagtg
cttctaacttgcagtttagatggcgctgttaggttatggagtgaaattgatgctgggagg
attagaagatctggaaaggatagcaatgaccatagatcaccgaggttgtctttttgtgtc
attggtgtgattgaggtttatcaaactcttaatggttctttgggctccgatatatttgta
ttttgggcaacggaagttgaaagcataaaactcctttatgaagaagcttgctattcatgt
ttaaatgattcacagtatgacgatgccagtcggtgtgagtggttaattggcttgggtcct
gatagagcaacaactctatgggcggtacattgtcttgatgattttgctccagtgagattc
ccaaggattactttatggaagaaacaagagttagtcagttctgaaatggaaacaagtcaa
gtattagttcacaaggtctttatgatgagaaatctggtttctggtccaccagttacttgc
tctttggtagagttatcaccttgcaattcttttacctggatacaattatactttcaaaga
ccaactagggaaggtaaatctgccaatggatacaatactgagaatcctacgccgtctgaa
agtaaaggagttatgaaagctgacggccacactggaaaaattttgcaaattgcagttcac
ccgtccatttcaggtgttgaactagccgcttctttagatagacatgggatgcttcttttt
tggtcattttcaacctttttcagtagtcacattggtttgccaacatcaactccctcttgg
aaactctacggaaaaatttcgttttctggatgctctcattctcctaattacacttgcttg
tgttgggccccagctattttgagtgaggaccgagctcttctactggggcattctgatggt
atcgactgctttatccttcagacttcaaaaggtgatgaacataatctttcttttcataag
ctatgttctattccatttggggcttgcggtcaccaacaaagggtgagtagaatatgctcg
attcctttacctcctgattgcgatgaaactgttagctcttgtaagtttctgctcgttgca
ctatggatggatagatttcaggctcaatcgtgggaaataaccatacactataatggttca
tgtcgctgctgttgtgatgaccatttgcagatatttgaatctgattttgctggtaaaaaa
ttcattgtctcagttgaaccatgctcctcagtcattcctgctcctcatgacgatgaccaa
gttacaagctattccgtggcctgccccaatgacttaattgtatctttggaacagaagcta
agttctgataatggaaggggcggctgctatgcttatcacatgataactggttgcatgaat
ggcagtttaaagctgtggaggagcttgccaactcgatcctcgagctctggtgctagctgg
gatcttgtaggtgttctttcttcaggccaaggttcaatcacagcccttactcctagccct
tgttgtcgaaagatagcaacatcttctccaagtgatcaacaaaattgctctagtatactt
tgtatatgggaatgcatgcatgtgcagaatgcaggtatcttccttctagaagataaatta
tgtctcgatggagaggtcgttgcattaagttggttgatgatgggaaacggccagttatta
ttaggggtatgcttgcaatctgaagtacgagtatatgcgctcagacgctgcggacatcag
agttttttgaaatctgggaaacccatggagaaaaacatttggcattgtatcgcagtgcat
agtgctagccctgctattcataacttcctctggggtcctagagggacaatcattgttgtt
cacgacaagtattttagcatttttagtcagtttttattgttagctgatgaggattttctg
tccaagtgttgcccaaagttctgccaggatggtcctttttgttgcaatggcggcatccgt
aaactaatgctttcaacaacctttactgattcgaaagaaccatcaatgaagatcaatgga
cagtatcagttctcttctgaggtgaatatgagagatgatccaaagtcatatgttcaaaac
tgtgagcaaatgcatgacattttaactaagatttggttctggagcatgtcagaaatagca
gaaaatatgggaggatccctgcctttataccatcctgagacacttttgatcaatatctct
tcaggtaacttcaaacgtgcatttgtagctttgcgtcatctggtcaaagacattgcttcc
aatggatcgtctaaaaaaagatacggcactaaagtgccacgcaatatgatttcaccactc
ccaatgtcaaattatcttgaagggctcccaacttcaagttcaaatgataatctatttcag
tggagtagttcacaaccacggataggattatctcagtttacctctggttggggtcataat
gatccccatattggattgacttcatcttctcaaagatctgaatttgtaggcttcattgaa
gctcttgattggttgcaccgagctggatgcatgacaaatattgaaatgatgcaggctatt
tcgttagtcgatctccttcaagaagttagtgatccacactccacctcggcttatggaagt
ctagatgaacctggtagaaggttttgggttgcagttaggtttcaacgattatttttttcg
cgaagattcaataggttgcctttggtggaagaactagatgtttcttcagaactgattgga
tgggctttccattcagattgtcatgaaaatttgttcaactctcttttatcggctgagcca
tcttgggaagaaatgcgcagtataggtgtggggttttggtactcgaatgtgacacaattg
cgtttgaagatggaacgactggctagacagcagtacatgagaaacaaagatcccaaggca
tgttcactcctgtacatagctttaaacaggattcaagttttggctggcctgttcagaata
agcaaagacgataaagacaagccattggctacatttctgttgagaaattttcaggaggat
aataataaggctgctgctctaaaaaatgcatatgtactaatgggaaagcatcagctagag
cttgctgtagctttctttctgcttggaggggatctttcttcagctgttagtgtctgtgct
aaaaacctaggggatgagcagcttgctcttgtaatttgtcgccttatcgagggttatggt
gggccttcagagcacaaacttatttcaaagtttctccttccatctgcactaagcaaagac
aacaattggatggcaagttttctggagtgggtgttggggaatcattcccagtcctttttg
agaatacttggtgttgaaatgagttcggagtcaaatagctcccttctttcgtctttgcat
gcaccatttctggatccaagtatcagtcagtattgcatgatgttggctaccaagactgtc
atgaaaaatgctattggggagtaccgagctgctgtgttaagtcagtgggctgtactgatg
aatgtgacgtccttgagtagatgtggcctacctcttgaagctttggaatgccattcgtct
tctattagcttctttggcagtctagggcaagggagtacaatgcagagcccggatcacaat
gttcttgttgaaatgctgaaaccacccgcagataaacatttcttgaactggatatccaaa
gagacgtcacaccagattatgtctcattctaagctaaatttggctatgcagtacctgtca
aacttgttgacagaacatccaagttctgcagatattgagactgcatcttttgggatgttc
acgaactacgaccctgtggatcaagaatttgaaaagtcattgaacgaatttcacagcaat
ttgactgcagctattgcgtgttttcagcagaagttctttttgattcctcttcatttaatt
ttcatggctgcgttgttttttcaccataaaggcctagagtttattggaaacaatatattg
catgaatatatgctgaaagttcaatctgatgacaagtgccatgctgacaacttgttctca
catcctattccttccgatcttctattgaaagccgctgaggaattttcctgcatttttgca
aaatatgttcttttctcttgtgtaaactgccatcactcttcatatttggacaacgacagc
attgcttgtgaagccaggttttgttggcttgctgcttggggtttttccaaccaagggatt
acatggtcatttgggtgtttaacagccatgcttaggttgattcttagaccctacaccaaa
gaatttgagatgatgctttttcatattctggctttggtcaagtaccatgtatttttttca
tcagcttggcttcaaaggaatctcaatgctcttcttgttattgttaaacctattttaacc
ccattaatgagagggaatgtgtctaatgagcttacagtagaggacctcaatgcgcttctt
agtgagattgtggagaaacttactcatgagtcaacttatgttcaattaccaacctgtgtt
gagatagatggacgtaagctagaacagaatgtaggaagtgtgccatcagctccagaagcc
aagagctgggagcttatgagtggttctctgtgggtacacatggttaagtttttggaacat
cagcttaacacattgcccgtaattctcgatggtatatgcccttcccccaccccatctttg
tccatacccgattgcaaaaaattaccactggaaatgggattagtgtcaagtactttagtt
gaatttctaaagctcacgaaagcaggtgtttctttttattgttcgaggcaatttgtggta
aaccttcttcaggaagtcgacttaccaaacaaacttatcctctcatatttagaaaatggt
ttccctctgccagaactcagagataaatacaacaataaaagtctagaaaatacagaattt
ctggacagtggtagtgagctatcagctttgaagaaattatgtgttatttgtgctgatcga
agaataactcatggagcttttgagcaagaatattgcaattggcttccgtatgttaaacaa
aaatcttttggtggatggggcgaaacttatataaacatctcaagagagtatgaatctgag
gaaacttctttcaaaaaagatagacttgacagcccttctcatgctgttggatcacctctt
gcttgtctgtccccagatgatcaccctttcaaaagttttgggggaaatgatgtgtttgac
atgaagaaaactatgcctttccacaatcctaaagaaatatacaagagaaacggggaactt
ttagaggctttgtgcattaactctgttgataattgccaaggtgcagttgccagcaataga
aagggaatattgtttttcaactgggaagatggattgcttcatatggataaatcagactct
ctctgggaggaagctgattggccacataatgggtgggctggatctgagtctaccccggtt
cccacatgtgtttctcctggcgtgggtctggggagtacgaaggacacacatctagggtta
ggtggagctaccattggtgcagctgctgtgcctagagcaggctgggatttaactggtggt
ggagcgtttggaattcctggttatgctggtgtaggagcatctggtcttggctggggggtc
caagatggttttgatgagtttgtggatcctcctgcaactgttgacaatgtcaggtccagg
gcgttggcatctcatccttctaggcccttcttcatggttggctctagcaatactcacata
tacctgtgggagtttggtgaggaaagagctatcgctacatatggagttcttccagctgca
aatgtccctcctccatatgctctcgcctcagtgtcagcagtgcggtttgacaactgtggg
catcgatttgcaactgctgcattagacggcactgtatgcacatggcagcttgaagttgga
gggcagagcaatatccggccaacagaatcgtctgcctgctttagcaatcatacctcggat
gttacttatgttactgctagtggatcaattattgcagcttctggatatagctccaatggt
gttaatgtggtagtctgggacacactcgctcctcctgccacttctcaagcttccattatg
tgtcatgaaggtggtgctcgctctctttcagtgtttgacaatgacattggtagtgggtct
atttcacctctcattttgacgggcggaaaagaaggtgatgtgggccttcacgacttccgc
tacatagctactggaaagacaaagaggcacaagcacttcgacactggtgaacacaacata
aatgcttcatcctcgggctatatgcagaacaaaaccggggatcagaataggaatggaatg
ctctggtatataccaaaggcccactccgggagtgtaactaaaatcaccacgattccaaat
accagttttttcttaactggaagcaaggacggggatgtaaaactttgggatgccaagatg
gccaagttggtgtttcattggccaagattgcatgaaaggcacacctttctgcaaccaagc
tcccgtggtttcggcggagttgttagggctgctgttacagatattcaggttgttccacaa
ggttttctttcatgtggtggagatggtttagtaaaatttatcaggtttcataatttccgc
acatga
DBGET
integrated database retrieval system
