Primulina eburnea: 140823097
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Entry
140823097 CDS
T11060
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pebu Primulina eburnea
Pathway
pebu03013
Nucleocytoplasmic transport
pebu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140823097
03015 mRNA surveillance pathway
140823097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140823097
03041 Spliceosome [BR:
pebu03041
]
140823097
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140823097
Spliceosome [BR:
pebu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
140823097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
140823097
NCBI-ProteinID:
XP_073040337
LinkDB
All DBs
Position
2:complement(37677300..37683531)
Genome browser
AA seq
914 aa
AA seq
DB search
MSGGFFRGTSTDQDTRFSNKKAKLLKSKKFASELETLVDMTKVKLDVMRPWIAKRVTELI
GFEDEVLINFIYGLLEGKEVNGKEIQISLTGFMERNTGKFMKELWLLLLSAQQNFSGIPQ
QFLDAKEEETKKKKADTDRIAHEILRKKEKEKQELERETAKMDGDGDTLRDKAAELELNS
KPGSMVSSFQPADENKQRERKSMRGRFSPTRNCFLNRDSKSPDLGYHSSSPSDRWSSRSV
SRSPPRKSRSMSSERRYPTSPRQSPTPRKRHVVQPSPSPPRRRSSYSKRRSISPPRRRSP
SPSRYRARLPRRNRSRSPLSHRSRSPFNRRSRSPRRRSRTPIRTSTAHHKFPSPFRRRSP
SPLRRRSPSPVRRKSPSPARRRSPSPLKHRTSSPLSDKSPSHGQRRSPSALHHRPRSPFH
RKPPYVGRESRSPVRRRYQRSPSTPRQQSISPARRMSSMIGRKKSLSPVRRRSPRESSSP
SSIQRNSISPVWRESSKSKRSPQQSHGERVRSLEKNSPAHFNSPSERAELSAKNHRGSKP
VDVRPFISLRSPQRDMLDQNDLHGKEPALSLSKKKTPLVSDASRERAHCEEQRSSIPRDS
LHQRMERVIRPESPIPMLKAAGPKHHSDHYGASVEDKNFSAREIREQKYGRGTISLASDQ
RKDLIDSTKVHVLDDDAKSTKSQLTSSEGIPDRMNRRERYEKPESSEIRKTTTASEKKSE
SYVDEGDRAGDMNSGPLGDSKRDYRLQESAVLPKLSRKSELNDLNGSTDSPSKEFDEHKT
KVKEKKKRSKSDRHDVESDDCSSDDSYEERKEVKRRRKEEKKLKREERRRRRDERHRRKE
ERRAEKWKLKSVDTGNPLSDLEGDYSEDDNDHKRVSQTRGNKDTKSEQKNLEIELREKAL
ESLRAKKGIGNSKD
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggattttttcggggcacgtccaccgatcaggacactcgtttctcgaacaag
aaagcaaagcttcttaaatctaaaaaattcgcctctgaattggaaaccctggtggacatg
acaaaagtgaagttggatgttatgaggccatggatagcaaagcgtgtcactgaactaatt
ggatttgaggatgaagtacttatcaactttatctatggacttctagagggaaaggaagtt
aatggaaaagaaattcaaatttcacttactggatttatggagagaaacactggaaagttc
atgaaagaattatggttgttgcttctaagtgcgcagcaaaatttcagtggcattccacag
cagtttcttgatgcgaaggaggaggaaactaagaagaagaaggctgatacagatcgtata
gctcatgaaattctcaggaagaaagagaaggagaagcaagaattggaacgcgagactgcg
aagatggatggtgatggtgatacattgagagataaggctgctgagttggaactcaattca
aaacctggttccatggtgtctagctttcagccagcagatgagaacaagcagagggaaaga
aaaagcatgagagggcgctttagcccgacaaggaattgtttcctcaacagggattcaaaa
tctccagatttgggttatcattcctcctctccaagtgacaggtggagttcaagaagtgtt
tctagatcacctccacggaaaagtcgatcaatgtcatctgaaagacggtatcccacttct
ccaagacagtccccaactcctcgcaagaggcatgttgttcagccctctccttctccacca
aggcgtagatcgtcctattctaaacgaagatcaatatctcctccacgacgtagatctccc
tcccctagtagatatagagcgcgtttacctaggcgaaacagatcacggtctccattgagc
catagatcacgatctccctttaatcgaagatcacgatccccgaggcgtcggtcgaggaca
ccaatacggacctcaacagcacatcataaattcccctctccttttcggcgtagatcaccc
tctcctttacggcgtagatctccatctcctgttcgacgcaaatcaccatctcctgcacga
cggaggtcaccgtctcccctaaaacataggacatcatctcctttgagtgacaaatcacca
tcacatgggcagcgtaggtccccatctgccttgcatcacaggccacgatctccatttcat
cggaagcctccgtatgttggtcgggagtcacgatctcctgtaagaaggcgataccaacga
tctccttcaactccgcggcagcaatctatatcaccagctcggcgtatgtcctcgatgatc
ggtcgaaaaaaatctttatccccagtccgtcgaagatctcctcgagaatctagctctccc
tcttccattcaacgcaattccatttctcctgtttggagagaatcttcgaaaagcaagaga
tcacctcaacaatctcatggagaaagggtcagaagcttagagaaaaattctcctgctcat
tttaattctccaagtgaaagagctgagctctctgccaagaatcatagaggatcaaaacct
gtggacgttagaccctttatttctttgagatcaccacagagggatatgctggatcaaaac
gacctccatgggaaagagccagcactgtcactttccaagaaaaagactcctcttgtatca
gatgcttctagggaaagagctcactgtgaagagcaaaggtcgtccattcctcgtgatagt
cttcatcagcggatggaaagagtcattcgtcctgagagcccaatccctatgttgaaggct
gctgggcctaaacatcacagtgatcattatggggcaagtgttgaggataagaacttctct
gccagggagattagagagcaaaaatatggacgtggaacgatttctctggcatctgatcaa
cgtaaagatttaattgactctaccaaagttcacgttcttgatgatgacgcaaagtcaaca
aagagccaattgacaagcagtgaaggaatacctgacaggatgaatcgcagagaacgctat
gagaaaccagagtcatcagaaattcgtaaaacaaccaccgcgagtgagaaaaaaagtgag
tcatatgtcgatgagggtgacagagctggcgacatgaatagtggtccgttaggtgatagc
aagagagattataggttgcaagaatcggcagttttgcccaagttgtcaaggaagtctgag
ctgaatgatctgaatggttctacagattctccctccaaggaatttgatgagcacaaaact
aaagtcaaagaaaagaagaaacgcagcaagtcagataggcatgatgtggagtcggatgat
tgttccagtgatgattcttatgaggagagaaaggaggtcaaaaggaggagaaaagaggaa
aaaaagctgaaaagagaggagaggcgtcggagacgagacgagcggcatcgtagaaaggaa
gaaaggcgtgcagagaagtggaaattgaagtcagtggacaccggtaacccattatctgat
cttgagggagattattcagaagatgacaatgatcataaacgggtgtcgcaaacaagagga
aataaggatactaaatccgagcagaaaaacctcgagatagagttacgtgagaaggctctt
gagtcacttcgagccaaaaaagggatcggcaattcaaaggattga
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