Primulina eburnea: 140823282
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Entry
140823282 CDS
T11060
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
pebu Primulina eburnea
Pathway
pebu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140823282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pebu03036
]
140823282
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140823282
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
140823282
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
140823282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
HDA2-3
WHD_SOWAH
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
140823282
NCBI-ProteinID:
XP_073040649
LinkDB
All DBs
Position
2:41928711..41937037
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AA seq
1213 aa
AA seq
DB search
MEAEEQEDRVLLSTLGVTSANPEDIERAILEKARKDVTDGNEAGGNREVEAHVGSKNDKG
FSANIKKLRAVELEIGAVTSAVEQFKNSKRKEDPSFDGDIRKKHRNLESDEVYQASPDSL
TLQHALAADRLESLIKTRAQLQNDVSVFSKDNLHSKLIRDLVKDDSESKQLLKEVVETSK
DKNKRLESVPFVEDDDFETVLTTATSGFVETERDESIRKGLLTPFHKLKGFERRIQEPGS
SNRQRANENMEENNVLASSSIARAVRSMSEAAQARPTSILVDPEMLPRLDAPSHPFQRLR
KPLKVPRPLEIGTKKDKDTKKKRRPQPGKKWKKMTSRDDKILQEDTEISSNEEPKFVNEE
VDDEGPSFVTLEGGLKIPETIFSELFDYQKIGVQWLWELHCQKVGGIIGDEMGLGKTVQV
LSFLGSLHFSGLYKPSIVICPVTLLQQWKREARRWYAGFHIELLHDSAKKKSSIKKPIKS
YDSDYDSEVSEDIEREEKAYSKSTKKWDSLINRVLRSESGLLITTYEQLRLLGDKLLDIE
WGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGV
LPVFEAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLVMPYLLRRMKADVDAQLPKKTE
HVLFCSLTPEQRSIYRAFLASSEVEEIFDGSRNSLYGIDVMRKICNHPDLLEREHCHTNP
DYGNPKRSAKMKVVAQVLKLWKEQGHRVLLFAQTQQILDILENFLAADGYNYRRMDGLTP
VQQRMTLIDEFNNSDDVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWR
IGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILQNPQQRRFFKSRDMKDLFTLNDD
EERDSTETSTIFSQVAEEINAIGAENQKLDKSKLIELKSNTDCSPVDRGHNSASDGMGEG
SGDHNRRKTDDETSILMSLFDAHGIHSAVNHDAIMNAHDEEKIKLEAHAAQVARRASEAL
RQSRILRSLDSITVPTWTGKSGSAGAPLSSKGKFGSTVNSRLVSASKATEEASNTESSRL
NGFVAGALSGKALSSVELLEKIKGNREQAINDGIKHQIRLASSTTRREQSSSNGTSRSSN
SLIVQPEVLIRQICTFIQQKGGRIDSASIVDQFKLRIPSKDLPLFKNLLKEIAILEKNPN
GSNWVLKPEYQDQ
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagaagaacaagaagatagggtcttgctgagcactttaggtgttacatctgca
aatcctgaagatattgaacgggccattttggaaaaggcaagaaaagacgtgacagatggt
aatgaagctggagggaatagagaggtggaagctcatgttggatcaaagaatgacaaagga
ttttctgctaatataaaaaaactgagggctgttgaacttgaaataggtgccgtcacatct
gctgtggagcagtttaagaattctaaaagaaaagaggatccatcttttgatggggatatt
agaaaaaagcataggaacttagagtctgatgaagtataccaggcatccccagatagtttg
acgctgcagcatgctcttgctgctgaccgactagaaagcttgataaaaactagggctcag
cttcagaacgatgtttcagttttttcaaaggataacctgcactccaagctgataagagat
ctcgtcaaggatgattctgaatcaaagcaactgttgaaagaagttgtcgaaacaagtaag
gataagaacaaaagacttgaatctgttccatttgttgaagatgatgattttgaaactgtc
ttgaccacagcaacttctggatttgtggaaactgaaagagacgagtcaattcgtaaggga
cttttgacaccctttcacaagctcaaaggatttgaacgtcgcatccaagagccagggtca
tccaacagacagagagcaaatgagaatatggaagaaaataatgttcttgcttcatccagc
atagctagagcggttcggtcaatgtcagaggctgcacaagctcgccccacatcaatttta
gttgatcctgaaatgctaccaagacttgatgcaccaagccatccttttcaaagactgaga
aagcccttgaaggtccctcggcctttagagatcggaactaaaaaggataaggacacaaaa
aagaagagaaggcctcaaccagggaagaaatggaagaagatgacctctcgtgatgacaaa
atcttacaagaagatactgaaatctcaagcaatgaagaacctaaatttgttaatgaagaa
gtggatgatgaagggccttcatttgtgacacttgaggggggcttaaagatcccagaaaca
atttttagtgaactattcgactatcagaagattggtgtacaatggttatgggaacttcac
tgtcaaaaagtcggtggcattatcggggatgagatgggtcttggcaaaactgtacaggtt
ttatcttttctgggatcgttgcatttcagtgggttatacaaaccaagcattgttatctgt
ccagtcacactcttgcagcaatggaagagagaagctaggagatggtatgcaggctttcac
attgagttgttgcatgattcagctaagaaaaagtctagtattaaaaagccaatcaaatcg
tatgatagtgattatgacagtgaagtttcggaggacattgagagggaagaaaaagcatat
tcaaaaagtaccaaaaaatgggattctttgataaatcgtgtcttgagatcagaatctggc
ttactgataaccacttatgagcaacttcgtcttctaggtgacaagttgcttgatattgaa
tggggatatgcagttctcgacgaaggacatcggattcggaatccaaatgcagaagtaact
cttgtttgcaaacaattgcagactgttcatcgtataataatgacaggcgcgccaattcag
aacaaactgtctgaattgtggtcattgtttgattttgtcttccctggaaagctgggtgtc
ctgcccgtgtttgaggctgaattcgcagttccaatatctgtaggtggatatgctaatgca
actcctttacaagtatccactgcttacagatgtgctgtcgtcctacgtgatctggtcatg
ccttacctccttcgacgaatgaaggctgatgtagatgctcagcttccaaagaagaccgag
catgtcctcttctgcagccttactccagagcagcgatctatataccgtgcatttcttgct
agttctgaagttgaggaaatttttgacggaagcagaaactctctatacggaattgatgtg
atgcgtaaaatttgcaaccatcccgaccttcttgagagagaacattgtcacacgaatcca
gattatgggaatcccaagcgcagtgcaaaaatgaaagtcgttgctcaagtgcttaaactg
tggaaggagcagggacaccgtgttcttctttttgcacaaactcaacagatacttgatatt
cttgagaattttttggcggctgatggctacaattacaggagaatggatggtcttactcct
gtacaacaaagaatgactttgattgatgagtttaacaattcggacgatgttttcattttt
atcttgacaaccaaggttggtggtctaggaacaaatttaactggtgccaacagggtgatt
atttttgaccctgactggaatccatcaactgatatgcaggctcgggagcgcgcttggcgt
attggtcaaaagaaggatgtaacagtttatagactaataacccgtggaacgattgaagag
aaggtgtatcaccggcagatctacaaacatttcctgaccaataagatattacagaatcct
cagcagagaagattcttcaagtctcgcgatatgaaggatcttttcacattgaatgatgat
gaagagcgtgattccactgaaacgtccaccattttcagtcaggtagcagaagaaataaat
gccattggggctgagaatcaaaagctcgataaatccaagctcatagaactaaaatcaaat
accgactgttcgccagttgacagaggtcacaattcagcgagcgatggaatgggagaaggg
agtggtgatcacaaccgtaggaagacagatgatgaaacgagtattttgatgagcctcttc
gatgctcatggtattcacagtgccgtcaaccatgacgcaataatgaatgcccacgacgaa
gagaagataaaactcgaggcacatgctgctcaagttgcgcgaagagcctcagaagctcta
cgacagtccagaatactacgtagcctggatagcataactgttccaacttggaccggcaaa
tcaggttcagctggcgctccattgtcttcgaaaggaaaatttggctctactgttaattcc
cgattagtgagtgcctcaaaggcgacagaagaagcctctaatacagaatcaagcaggcta
aatggatttgttgctggagcattgtctggaaaagcattgtcatcggtagagttgttagag
aagattaaaggaaaccgagaacaagccatcaatgacggaatcaaacatcaaattaggttg
gcttcatcgacaacgcgaagagaacaatcttcaagtaatgggacttctagatcatcaaac
agcttgattgtacagccagaagttttgatacgtcaaatatgtacctttattcagcaaaaa
ggtgggaggatagattcagccagcattgtggatcaattcaaactcaggataccttctaaa
gatctgccactgttcaagaatcttttaaaggaaatagctattttggagaaaaaccctaat
ggatctaattgggttctgaaaccagagtaccaagatcaatga
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