Primulina eburnea: 140823326
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Entry
140823326 CDS
T11060
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pebu Primulina eburnea
Pathway
pebu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140823326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140823326
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140823326
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
140823326
NCBI-ProteinID:
XP_073040706
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Position
2:42417482..42421053
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AA seq
586 aa
AA seq
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MAYAFPEEVLENVFSFLSSDKDRNAVSLVCKSWFEIERWCRRRIFIGNCYAVTPKIVIRR
FPDVRALELKGKPHFADYNLVPEGWGGYVYPWIVAMSSSYPFLEEIKLKRMVVSDESLEM
ISKSFKNFKVLVLSSCEGFTTEGLASIAANCRNLRELDLGESEVEDLSSHWLTHFPDSYS
SLESLNISCLGSEVNFSVLERLVVRCPNLKTLRLNRAVPLEKLPILLQHAPQLSDLGTGA
YFAEIRPDIFSNLADAFSLCKQLKSLSGFWDVVPAYVPAMYCVCSRITSLNLSYATIQSM
DLIKLVSQCRNLQRLWVLDYIEDIGLEAIAASCKDLQELRVFPSDPFVNEPNVSLTEQGL
VAISEGCPKLQSVLYFCRQMSNAALLAIAKNRPNLIRFRLCILEPRSPDYLNLEPLDNGF
GAIVENCKELRRLSLSGLLTDKVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDQALLANAGKLETMRSLWMSSCSVTFEACKLLGQKIPRLNVEVIDENGLL
DSRPESCPAEKLYVYRTVAGQRVDMPGFVWTMDADGVFVKHKLLGH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgcgttcccggaggaggttctggagaacgttttctcgttcctgagctctgat
aaggatcggaatgcggtctcgttggtgtgcaagtcgtggttcgagatcgagaggtggtgc
cggaggaggattttcattggaaattgctacgccgtgacgccgaagatcgtgatccggagg
ttcccagatgtgcgggcgctggagctgaaggggaagccgcacttcgcggattacaacctc
gtgccggagggttgggggggttacgtttacccgtggatcgtcgccatgtccagttcttat
ccctttctggaggagatcaagcttaagaggatggtagttagtgatgagagcctggagatg
atctcgaaatcgtttaagaatttcaaggtgttggtgctctcttcatgcgaaggtttcacc
accgaaggtctagcttctatcgccgcaaattgcaggaatctccgagaattagacttgggg
gagagtgaagtggaggacttgagtagtcattggctaacccattttccggacagttattct
tcactagagtctcttaatatatcttgcttggggtcagaggtgaatttttctgtgttggag
cgattggttgtccgatgcccaaatctgaaaacacttaggctaaaccgtgctgtacccctt
gagaagctaccgattctacttcagcatgcaccccagttgtctgatctaggtactggtgcc
tattttgctgaaattcgcccggatatcttctcaaacttggcagatgccttttcactttgc
aagcaactcaaaagcttgtctggtttttgggacgtggttcccgcatatgttccagcaatg
tattgtgtttgctctagaattacttccttgaatttgagttatgccactattcagagcatg
gatctcatcaagcttgttagccaatgtcggaacttacagcgactatgggttctggattac
atagaagatattggtcttgaagctattgctgcatcttgcaaggacctgcaagagcttcgt
gtatttccttcagatccttttgtaaatgaaccaaatgtatctttgacagaacaagggctt
gttgctatatcagagggctgccccaaacttcagtctgttttatatttctgccggcagatg
tcaaatgctgcattacttgcaatagcaaaaaatcgcccgaatttgatccgcttccgattg
tgtattcttgagcctcgatcccctgattacttaaaccttgaaccacttgacaacggtttt
ggggctattgtagaaaactgcaaggaactgcgtcgcctctctctctctggcctcctcaca
gataaagtatttgaatatattgggacacatgctaagaaattggagatgctctctatagct
tttgctggggatagcgacttgggcctacatcatgtgttgtcggggtgtgaaagtcttcga
aaattggagatcagagactgcccatttggggatcaggcactcttggccaatgctgggaag
ctggagacaatgcgatccctttggatgtcttcttgctctgttacttttgaagcatgcaag
ctactcggtcagaagatacctcgactcaatgttgaagttatagacgagaatggtctccta
gattctaggcccgaaagctgccctgctgagaaactttatgtttacaggacggttgcagga
caaagggtggatatgcctggttttgtttggacaatggatgcagatggggtttttgtgaaa
cacaaactcttaggccattag
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