Primulina eburnea: 140823522
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Entry
140823522 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pebu03000
]
140823522
03036 Chromosome and associated proteins [BR:
pebu03036
]
140823522
Transcription factors [BR:
pebu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
140823522
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
140823522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Motif
Other DBs
NCBI-GeneID:
140823522
NCBI-ProteinID:
XP_073041010
LinkDB
All DBs
Position
1:complement(4743596..4761276)
Genome browser
AA seq
1347 aa
AA seq
DB search
MDTEKEERNGEEIGDLQNDSSNDSVEIDDEGDDEDDEDEEVPHSEEPLTDKDIEELIAEL
LEVEGKAAEAQEALEEESLLNVGADVRKELALSLSGDDLEKAVAEEMAVFKEEWEMELDE
LETESAHLLEQLDGAGVELSSLYKWIEKQAPSGCCTEAWKKRAHWVGNQLSLDAMESVSQ
AEEYLQIHRPVRRRHGKILEEGASGFLAKKVVASECSPAVNDGTDVDWNSFSKMCSNDSG
LKDVRFGSKDWASVYLASTPQQAAELGLKFPGVDEVEEIDDVDGTSSDPFVADAVANERD
LNLTEEQKRNFRKVKEEDDVNTDLQLHIRLKRRRLRKQSKKDTIPMEVSSIDGARECQLD
TSLAHDDEVLEDVTGLHGTNNEKIELSRVVAVKARADDGTSLINGSGSPGLVELTEVKHP
SDCDLLQSDKIMNSEGQIVSSSDSASDDSDTDLRVTTSSKRRQKKKIRRILDDAELGEET
KKKIAIEKERQERLKSLEARIATKSMVMSSMLSSENSIDGAGSEMLGDTSTGFIINVVRE
EGEEALRIPPSICTKLKLHQIAGIRFMWENIIQSVRKVRSGDKGLGCILAHTMGLGKTFQ
VIAFLYTAMRSADLGLKTALIVTPVSVLHNWRHEFLKWRPSELKPLRIFMLEDVLREKRI
ELLTKWRSKGGVFLIGYAAFRNLSLGKYVKDRELAKEISQALQDGPQILVCDEAHMIKNT
RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG
QHTNSTALDVKIMNQRSHILYEELKGFVQRMDMSVVKNDLPPKTVFVITVKLSPLQRKLY
KRFLDVHGFSKEKVSKEKLIKRSFFAGYQALAQIWNHPGILQLRKENKDSSKYEDVESGL
ADDSSSDDVDYNIISGEKLSNSHRKNENRFLKEDWWRDLLHENNYEVDYSGKMVLLLDIL
KMCSGIGDKALVFSQSLLTLDLIEFYLSKLPRPRKNGKLWKKGKDWYRFDGRTESIERQK
LVERFNEPSNRRVKCTLISTRAGSLGINLHAANRVIIVDGSWNPTYDLQAIYRVWRYGQT
KPVFAYRLLAHATMEEKIYKRQVTKEGLAARVVDRQQVHRTMSKEEILHLFEFGDDENTD
AMLPELGEETGLVVEPNRAGQNSLNQKLQPPSGSASVDKIIQRLIDKHHPSWISNYHEHE
TLLQENEEEKLSKEEQDLAWEVYRKTLEWEETRRFTPEESILEQQKILVNASAPGEQQQA
XAGISTAEVPEEDYRLERIRQRHRNRYVLRHCTNLSHLMTLRSQGKVGGRTICGQCAQEI
RWENLKPDSRMTMSPAAVPDILSPSSP
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggacacagaaaaagaagagagaaacggggaagaaattggcgatttgcagaatgattct
tccaacgattccgtggaaattgatgacgagggtgatgatgaagacgatgaagatgaagaa
gtgccgcattctgaggaacctttgacggataaggacatagaagagctaatagctgagctt
ttagaagttgagggaaaagctgcagaagctcaagaagctctggaagaggaatcacttctg
aatgtgggggctgatgttaggaaagaattggccctttctctctccggcgatgatttggag
aaggctgttgcagaagagatggcagtgttcaaagaagagtgggaaatggagcttgatgag
ctcgagaccgagagtgctcatttactggaacaacttgatggtgctggtgttgaactttca
agtctgtacaagtggattgaaaaacaggctcctagtggttgctgcacagaagcatggaag
aagagggctcattgggtcggtaatcaactatctcttgatgcaatggaatcagtttcacag
gctgaagagtatctccagatccacaggcctgtaagaaggcggcatgggaaaatactggag
gagggtgccagtggtttcctggcaaaaaaagttgtggccagtgaatgcagtcctgctgta
aatgatggtacagatgtagattggaattccttcagcaaaatgtgctctaacgactcaggt
ttgaaggatgtcagatttggcagtaaggattgggcttctgtttaccttgccagcactccg
cagcaggcagctgagctgggcctgaaatttcccggagttgacgaggtggaagaaattgat
gatgttgatggcacgtcgagtgatccatttgttgccgatgctgtagcaaatgaaagagat
ctgaatctcacagaagagcaaaagagaaactttagaaaggtcaaggaggaagatgatgtt
aacactgatctccagcttcatattcgtttgaaacgaaggagacttagaaagcaatctaag
aaggatactattccaatggaagtttcctctatcgatggggcaagggagtgccaactagat
acttccttggctcatgatgatgaggttctagaagatgttactggacttcatggtactaat
aacgaaaagattgagttgtctagagttgttgctgtgaaagcaagggccgacgatggtact
tcattgataaatggctccggttcaccgggcttagttgagttgacggaggttaagcacccc
agtgattgtgacctcctacagtctgacaaaatcatgaactctgaaggtcaaattgtctcg
agttcagattctgcttcagatgattcagatactgatctcagagtcactaccagcagtaag
agaagacaaaagaagaaaattcggcgaatcctcgatgatgctgagttaggagaagagacc
aagaagaaaattgcaatagaaaaggaacgtcaagagcggcttaaatctttggaagcacgg
attgctacaaagtccatggtgatgagttcaatgctcagtagtgaaaattcaattgatggt
gctggttctgaaatgctaggtgatacttcgactggtttcataattaatgtggtaagggag
gaaggtgaagaggccctgaggattcctcccagcatatgtacaaaattaaaactccatcag
attgcaggaattcgattcatgtgggaaaatattattcagtcagtacgaaaagtgaggtct
ggtgataaaggtcttggttgcattctggctcatacaatggggttaggtaaaacttttcag
gttattgcttttctatacactgctatgagaagtgctgacctaggattaaaaactgctctc
attgtgacacctgtaagtgttctacacaattggcgccacgagtttctgaaatggagacca
tcggagctaaagcctctgcgcatcttcatgcttgaagatgttctaagggagaaaaggatt
gagttattaacaaagtggcgatccaaaggtggtgttttcttaattggctatgctgccttc
cgaaatttgtcccttgggaagtatgtaaaggatcgagaattggcaaaggagattagtcag
gcacttcaggacggacctcaaatccttgtctgcgatgaagcccatatgataaaaaacacc
agggctgatacaacccaggctttaaaacaagtgaagtgccagagaagaattgcattaact
ggatcgcctctccagaacaatcttatggagtattactgtatggttgattttgtaagagaa
ggatttcttggtagcagccatgaatttaggaatcgtttccaaaatccaatagaaaatggt
caacacaccaattctactgcattagatgtgaagatcatgaatcaaagatctcatattctg
tatgaggagttgaaaggatttgttcagaggatggacatgagcgtggttaaaaatgattta
cctcctaaaactgtgtttgttataactgtaaagttatctcctttacagagaaaactctat
aaaagatttcttgacgttcatggtttctcaaaggaaaaggtttcaaaggaaaaactaatc
aagagatctttttttgctggataccaggccttggctcagatatggaatcatcctggaatt
ttgcagcttaggaaagagaataaagactctagtaaatatgaagatgttgaaagtggtctt
gcagatgacagctctagtgatgatgtggactacaatatcatttctggagaaaagttgagc
aattctcaccgaaaaaatgagaaccgatttcttaaagaggactggtggagagatcttcta
catgaaaataactatgaggtggattacagtggcaaaatggtattgctactagatattctg
aaaatgtgctcgggtattggtgataaggcattggtgttcagtcagagtttactgactttg
gacctgattgaattttatctctcaaaattacctcgtccaagaaagaacggaaaattatgg
aaaaaagggaaggactggtacaggtttgatggtagaactgaaagcattgagaggcagaaa
ctggttgagaggttcaacgagccttcaaacagaagggtcaaatgcactttgatatccacc
agggctggatctctcggcattaatcttcatgcagctaatcgagtaatcatagttgatgga
tcttggaatccaacatatgatctacaagctatataccgagtttggagatatggccaaacg
aagcctgtgtttgcttatcgattacttgcacatgccacaatggaagagaaaatctacaag
cgtcaggtgactaaggaaggtcttgctgcaagggttgttgataggcagcaggttcacaga
actatgtctaaagaggaaatattgcatttgtttgagtttggggatgatgaaaatactgat
gcaatgctgcctgagctgggtgaagagactggactcgtggtggaaccaaacagggctggt
caaaattcattgaaccaaaaactgcaacctcctagcggaagtgcttctgttgataaaata
attcaaagattgatcgacaaacaccatcccagttggatttcaaattaccatgaacatgaa
accctcttgcaagaaaacgaagaagaaaagctgtctaaagaagaacaagatttggcttgg
gaagtatatcggaagaccctcgagtgggaggagacacgacgtttcacgcctgaagaaagc
atactcgagcagcagaaaatccttgttaatgcatctgcaccaggtgagcagcagcaggca
nntgctgggatttcaactgcagaggtgcctgaggaggattacagacttgaacgaatcagg
caacgtcatcggaatcgttatgtgctgcgacattgcacaaatctttcacatttaatgacc
ttgagaagtcaaggcaaggtgggtggcagaactatatgtggacaatgtgcccaagaaatt
cgttgggaaaacctcaaaccggatagccggatgacgatgtctcctgctgctgttccagat
attttgtctccttcatcaccttga
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