Primulina eburnea: 140824423
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Entry
140824423 CDS
T11060
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Module
pebu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140824423
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140824423
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140824423
NCBI-ProteinID:
XP_073042116
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Position
2:449895..452682
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AA seq
404 aa
AA seq
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MFGVVLFIFALGSSHASCIFDCKDEDHFSVTDYGAKSDGRTDDSQAFLETWDAACTAPIP
SSRFIVPPNKTYLLDPIIFVGPCQPKTIYFIISGRIIGPELPSEWNGKDASGWLGFKDVN
GLNVDGFGTVDGRGQGWWDQSCRYHPQLKQCTTLAPTALKFMECNDSSVSNLKLVNSAQT
HLLLRGCDSFVVNNVVIESPANSPNTDGIHIHSSHNVIITNSKFSTGDDCISIGDRISNI
KIYNVVCGPGHGISIGSLGRRGNYVQVEKIHISDAFFKGTTNGARIKTWQVGRGYVRDVT
FENLMFDSVQNPIIIDQNYCDVRNACKEEETGVEISNVRYKEIYGTSSGEIAVNLNCSYS
VPCYQILMESIELVSTTPGEDVIADCANAYGQEFDVSPASCLLN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagtagtgttattcatttttgcgttaggttcttcacatgctagttgcatattt
gactgcaaagatgaagaccattttagtgtgacagactatggagccaaaagtgatggtcga
actgatgattcacaagcattcttagagacatgggatgctgcgtgtaccgcaccaattcca
tcttcaagattcattgttcctccgaacaagacatatttactcgacccgattattttcgta
ggtccatgccaacctaagactatctatttcattatttctggcagaattatcgggccggaa
ctgcctagcgaatggaatgggaaggatgcgagtggatggctaggatttaaggatgtgaat
gggcttaatgtagatggatttggcactgtggatgggcgtggccagggatggtgggatcaa
tcatgcagatatcatcctcaattgaaacaatgcaccacattggctccaactgcattgaag
tttatggaatgtaacgacagcagcgtcagcaacttgaagctcgttaacagcgcgcaaaca
cacctattgttgaggggatgcgatagttttgtggttaacaatgttgtgatcgagagtcct
gcaaattctcccaacaccgacggcattcatatccactcctcccacaatgtgatcatcacc
aattccaaattttccactggggatgattgtatttctattggcgatcgaatttccaacatc
aaaatatacaatgtggtgtgtggacctggtcatggtattagtattggaagcctgggaaga
cgaggaaattatgtgcaagtagagaagattcatatatctgacgcattcttcaagggaacc
accaatggagccagaatcaagacttggcaggtgggaagaggatacgtccgagatgtgaca
ttcgaaaacttgatgttcgattccgtccaaaatccgataatcatcgatcaaaattactgt
gacgttagaaacgcatgcaaagaagaggaaaccggagttgaaatcagcaatgtgagatac
aaggaaatatatgggacatcgagcggtgaaatcgccgttaatctaaactgcagttactct
gtgccgtgttaccaaatattgatggagtcgatagaattggtatcgactacacctggagaa
gatgtcattgcagattgtgccaatgcttatggtcaagaattcgatgtttctcccgcttca
tgtcttttgaattga
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