Primulina eburnea: 140825224
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Entry
140825224 CDS
T11060
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pebu04131
]
140825224
Membrane trafficking [BR:
pebu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
140825224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
140825224
NCBI-ProteinID:
XP_073042971
LinkDB
All DBs
Position
3:complement(2007592..2017851)
Genome browser
AA seq
1474 aa
AA seq
DB search
MASNPPPFQVEDNTDEDFFDKLVNDEDDGDFGITSTSEGRVFSDGNESDESKAFSNLNIN
EFDNSCDVSHYNTSNSISNIVDNLSAEIKTAKQIDDGGTVDYISNPLASEKSFEFGNLIS
EPKNEDEIAEVLSDSTFMGKSSGERLSDATVVSKSSAESGSPGVKEMDWSAFHSDSNKND
GNGFGSYSDFFTELGGDNAGDAWGNVGDSLDTVPNVTIGSEGHGHAHMENSNDLGEYNEG
NDYSITANQSAESQDLNSSHYWEGMYPGWKYEPSTGQWYQVDGYDAGASAQAHIDTNLSS
TWGLSDGKADISYFQQTAQSVTETVPESGKLECVTDWNQASQVSDAKETTSNWNQVSQLS
SDTSGVSYPASQDNNGYPPHVVFDPQYPHWYYDTIAQEWFPIESYTASTQSGTKVQDQMN
QDRHALTNTFSQNNDQRMYSTHNQGNSYQNQAFSSQGQEHSWTGSLSDYNQQSSKMWQPD
TLSNNEATSQYGNGQMKNRYAQNFSIVAQGSPQNAFHHGVTGSYYENVAQGPKDFSVGSG
TQGFVAGGNLSQQFNESRINQHSQNGVPSDYTRNQNSINFSQQMIQGTQISYASAGGRSS
AGRPPHALVTFGFGGKLIVMKDNSSTENLNYGSQNTTSGSISVLNLQEVVNENNASNNGM
GVCNYFQALCRQATPGPLTGGSVGIKELNKWVDERIANPESAEMDYRKAENSRLLLSLLK
LGCQYYGKLRSPYGTDAVSKESDGPESAVAKLFASTKRNNMQYGQYGAVVQCWQQMPSEG
QMQATAAEVQNLLVFGRKKEALQCAKEGQLWGPALVLAAQLGDQFYVETVKQMALQQMVA
GSPLRTLCLLIAGQPADVFSADTTAISSMAGLANLPQQPPQFLANGMLDDWEDNLAMITA
NRTKDDELVLIHLGDCLWKERSDIIAAHICYLVAEASFEPYSDSARLCLVGADHWKFPRT
YASPEAIQRTEIYEYSKSLGNSQFVLLPFQPYKLVYAHMLTEVGRISDALKYCQAVLKSL
KTGRNPEGENLRQLVSSLEERIKAHQEGGFSTNLAPKKLVGKLLNLFDSTAHRVVGGLPP
PAPTAGGPIQGNMNYHQTTGPRVSTSQSTWAMSSLVPSQSMEPISEWAADGNRMSMHARS
VSEPDFGRSPRQDQAQSLKEANSAGEQEKASAIGRRSRFGSFGFGSQLLQKTVGLVLNRQ
GRQAKLGDTNKFYYDDKLKRWVEEGAAPPAEEETLPPPPTAAIFQNGTSDYNLKAPLQNE
SSHVNRNPEYGSTSPLDNSSGIPPLPPTSNQYSARGRMGVRSRYVDTFNQGGGNTANSFQ
APAVPSVKPASSPNPKFFVPAPVASVDPSVDAPVNGMQDNPSTQEHPSTSPLSDTFQSPA
PPPTSMNMPRFASMDNIWNNGTSNYGSFSTPSRRTASWSGRLNDSFTPPHRAEVKPLGEV
LGMDPSSFTSSDPSFVHSSKNGGNVGDDLHEVEL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaatcctcctccatttcaggtggaggataatacagacgaggatttttttgat
aaattagtgaatgacgaagacgacggggattttgggatcacttccacgtctgaaggccgt
gttttctcggatgggaatgaatctgacgaatcaaaagctttttcgaatttgaatatcaat
gagtttgataatagttgtgacgttagtcattataatactagcaatagtatcagtaacatt
gtggataatttaagtgctgaaataaagacagcaaaacagattgatgacgggggaactgtg
gactatattagtaatccattagcgtcggagaagtcatttgagtttggtaatttgataagt
gaaccaaagaatgaggacgagattgctgaagttctatcagactcgacatttatgggtaag
agtagtggtgagcgtctttcagatgcgactgtggtcagtaagagcagtgctgaatcagga
tcaccgggagttaaggaaatggattggagcgcttttcattctgattcaaacaagaatgat
ggcaatggctttgggtcatactcagattttttcactgaattaggtggtgataatgctggt
gatgcatgggggaatgtgggggatagtttggacactgtgccaaatgttaccattgggagt
gaaggacatggacacgctcacatggaaaattctaacgatctcggggagtataatgaggga
aatgattatagtataacagccaatcaaagtgcggaatcacaggacttaaatagcagtcac
tactgggagggaatgtatccaggttggaagtatgaaccaagcactggacaatggtatcag
gtagatggttatgatgctggtgcaagtgcacaagcacatattgacactaatttatcttct
acttggggattatctgacggaaaggctgatatctcttactttcagcaaactgctcagtct
gttactgaaactgtgcctgagagtggtaaacttgagtgtgtcactgattggaatcaagct
tctcaggtgagtgatgcaaaagaaaccacatcaaattggaatcaggtttcacaattaagt
agtgatacctctggagtttcatacccggcttctcaagataataatggttacccacctcat
gtggtttttgatccccaatatccgcactggtattatgatactattgctcaggaatggttc
ccgatagagtcctacactgcatctactcagtcagggaccaaagttcaggaccagatgaat
caggatagacatgcattaaccaatacattttctcagaacaatgatcagaggatgtacagt
acacacaatcaaggtaatagttaccaaaatcaagcatttagtagccaaggtcaggaacac
agctggactgggtcgttgagcgactacaatcaacaaagctcaaaaatgtggcaacctgat
acattaagtaataatgaagctacttcacagtatggaaatggacaaatgaaaaatcgttac
gcacagaatttttctattgttgctcaaggaagcccacagaatgcctttcatcatggagta
acaggttcatattacgagaatgtagcacaaggtccaaaagacttttccgtgggttctggg
acacaaggttttgttgctggtggaaacttaagtcaacagttcaatgaatcaaggatcaat
caacatagccaaaatggtgtcccaagtgactacaccaggaatcagaactcaatcaatttt
tctcagcaaatgattcagggtactcaaatttcgtacgcttctgctggtggaaggtcttct
gcaggtcgtcctccgcatgctttggttacttttggttttggtgggaagcttattgtgatg
aaagataatagttctactgaaaacttgaactatggaagtcagaatactacaagtggttcc
atatcggttctcaacttacaagaagttgtgaatgaaaacaatgcatcaaacaatggaatg
ggcgtttgcaattatttccaggctctttgtaggcaagctaccccgggtcctcttactggt
ggaagtgttggcatcaaggagttgaacaaatgggtagacgagagaatagctaaccctgaa
tctgctgagatggactataggaaggctgaaaattcgaggttacttctctcactgcttaaa
ctgggttgtcaatattatggaaaacttcgatctccatatggtacagatgctgtatcgaag
gaaagtgatggtcctgaatcagctgttgccaagctttttgcatctaccaagagaaacaac
atgcaatatggtcagtatggtgctgttgtccagtgctggcaacaaatgccatcggaagga
caaatgcaggccactgctgctgaggttcaaaaccttctagttttcggaagaaagaaagaa
gctttgcaatgtgcaaaagagggtcagttatggggccctgcccttgttcttgctgcacaa
cttggtgatcagttctatgtggaaactgtaaagcaaatggcacttcaacaaatggtagca
gggtcacctttgcggacattatgcctgctaattgctgggcaacctgctgatgtcttttct
gcagataccacagccattagtagcatggctggtttggctaatttgcctcagcaaccacca
cagtttctcgcgaatggtatgctggatgactgggaggataatttagcaatgataactgca
aatagaacaaaggatgatgaacttgtgctcattcatcttggagattgtttgtggaaggaa
agaagtgatataattgctgctcacatttgctatttagttgctgaagcaagttttgagcca
tattcagacagtgcaaggttgtgtcttgtcggtgcagatcactggaaatttccacggaca
tatgccagtccagaggctatacagaggacagagatatacgagtattcaaaatcacttggg
aactcccagtttgtcctacttccatttcaaccatataagcttgtatatgcacacatgttg
acagaagttgggaggatatctgatgcgttgaagtactgtcaagcggtactaaaatcactt
aagacaggacgaaacccagagggtgagaatctcagacagttggtttcatctttggaagag
aggatcaaagctcatcaagagggaggtttctccacaaacttagcccctaaaaaattagtt
ggtaaattgctcaacctttttgatagtactgcccaccgtgttgttgggggtttaccgcca
cctgctccaacagctggtggccctattcaaggtaacatgaattatcatcaaacaaccggg
cctagggtatcaactagtcaatcaacatgggctatgtcatcattagtgccttctcaatcc
atggagcctataagtgaatgggcagctgatggcaaccggatgtcaatgcatgccagaagt
gtttcagaaccagacttcggtagaagtccaaggcaggatcaggctcagtcattgaaggaa
gcaaattccgctggcgagcaagaaaaagcatcagcaataggcaggcgatctcgatttggt
agttttggttttggatctcagctactacagaagaccgtaggtttagttctcaaccgtcaa
ggccgccaggctaaattgggtgatacgaacaagttttattatgacgacaaactcaagaga
tgggtggaggaaggtgctgcacctccagcagaagaagaaacacttccacctccaccgaca
gctgcaattttccagaatggaacgtcagattataacttaaaggctccgctgcaaaatgaa
agttctcatgtcaacagaaatcctgaatatggaagcacaagtcctctagataatagttca
ggaattccaccacttcctccaacttcaaatcaatactctgcccgaggaaggatgggcgta
cgatcgaggtatgtcgacacctttaaccaaggtggtgggaacacggcaaattcattccag
gctcctgctgttccttcagtcaaaccagcaagcagccccaacccaaaattttttgtgcca
gcacccgtggcctcggttgacccatcagttgatgctcctgtcaatggcatgcaagacaat
ccgtcaactcaggaacatccttccacctctcctttaagcgacacattccagtcacctgca
ccacctccaacatccatgaacatgccaagatttgccagcatggacaacatctggaacaat
ggtacaagcaattatggttctttttcgacaccttcacggcgtacagcatcatggagtgga
agattaaacgattcgttcactcctccgcatagggctgaagtaaaacctctgggagaggta
ttgggcatggacccgtcttcattcacatcaagtgacccttcttttgtacattcgtcaaaa
aatggcggtaatgttggagatgatcttcacgaagtggaactctga
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integrated database retrieval system
