Primulina eburnea: 140825325
Help
Entry
140825325 CDS
T11060
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
pebu Primulina eburnea
Pathway
pebu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140825325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pebu03036
]
140825325
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
140825325
INO80 complex (yeast)
140825325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
140825325
NCBI-ProteinID:
XP_073043127
LinkDB
All DBs
Position
3:complement(2773969..2787593)
Genome browser
AA seq
1522 aa
AA seq
DB search
MDSKTKYTYANLFNLEPLMNFQLPKQDEDSDCFESSSQDESKGNQGEAIGGHTNGIMSDR
RSRKKKRRSVYGSEEEEAGNYNPYISEERYRTMLGDHIQKYRRRVNNSSQSPAPAKTGTQ
VMKSGLGLKDQKLTGDNREGSHKVEPASDFLNIGSQKLGNYLESDNGLQYGAARINLEPS
FLDIGDGITYRIPLPYEKLSPSLNLPSMSDIRVEEFYLKGTLDLGSLAAMMASDNRFRQR
SRAGMGDSKPQYESLQEKLKAQSGHNSAENFCLKITAASLQSHGIPEGAAGGIRRSILSE
GGVLQVYYVKVLERGDTYEIIERSYPSKPKVKKDPSVIEREEIEKTLKYWVSMVRKDIPK
HHRNFTSFHRKQLTDAKRFSESCQREVKMKVSRSLKLMRGAALRTRKLARDMLLFWKRVD
KEMVEVRKREEREAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKTSQTSEAYT
AGDENSNDQEMLLGPAGALPGDEDDLEDAQLRNEALKAAHDAVSKQKQMTSAFDTECLKL
RQTSEIEASLQDASVSESSNIDLLNPSTMPVASTVRTPELFNGSLKEYQLKGLQWLVNCY
EQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDL
KTLPYWGGLQDRTVLRKNINPKRLYRRNAGFHILITSYQLLVSDEKYFRRVKWQYMVLDE
AQAIKSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNEWF
SKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELSGKTEITVHCKLSSRQQA
FYQAIKNKISLAELFDGNRGHLNEKKLMNLMNIVIQLRKVCNHPELFERNEGSTYFHFGE
IPNFLLPPPFGELEDICYSGGRNPIVYEIPKLVYQEVVRDSKLSYSRLGRGLSRVLVEKL
FNIFSPENICRSTLQLDYSSDGTSLQSGTFGFSRLIDLSPAEVSFLAVGSFMERLLLFVT
RSNRECLNGLSAMLLEDEDYGDYTHISKEKVRAVTRMLLVPSKSETNALRRKFSTGAGDV
PFEALITSDEDRLLYYIKLLHSVYSFIPRTRAPPINAHCSDRNFAYMMTEEWHHPWLKRL
LTGFARTSDFNGPRKPGISHQLIQEIDADLPVSQPALQLTYKIFGSCPPMQPFDPAKMLT
DSGKLQTLDILLKRLRAKNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD
MVNDFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD
VTVYRLICKETVEEKILQRASQKSTVQQLVMTGGHVQGDLLAPEDVVSLLIDDTQLEQKL
KEVSQQAKDRQKKKGGTKGIRIDAEGGGASIEDFTNLGYGSESELPEPDKPKPTNKKMYS
QRKAATDKKGQQKNSKLVGSSSPNSMIVDYEPDVPTQNSETLHQQRSKRLKRPTKSLNET
IEPAFTAIPPVFQDQNQIAPVP
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggactccaagaccaagtatacatatgcgaatctctttaatcttgagcctttgatgaac
tttcaactgccaaaacaagatgaggattctgattgttttgaaagcagtagtcaggatgag
agcaaaggtaaccaaggcgaagcaatagggggccatactaacggtataatgtcagataga
agatcgaggaagaagaagaggaggagtgtgtatggtagtgaagaggaagaagctggtaat
tataatccctatatctcggaagaacggtatcgaacaatgctaggagatcatattcaaaag
tacaggaggagagtgaataactcttctcaaagtccagcgcctgctaaaactgggacgcaa
gtaatgaaaagtggtctcggactaaaagatcagaaattaactggtgataacagagaaggg
tcacacaaagtcgaaccggcttcagattttctcaatattggttcccaaaagttgggaaat
tatttagaatctgataatggactgcaatatggtgctgccagaataaatcttgaaccttct
ttcttggatatcggggatgggatcacttacaggatccctctaccgtatgaaaagctgtcg
ccatcattgaacttgccgagcatgtcagacattcgtgttgaggagttttacctgaagggg
actcttgacctgggatcattggctgcaatgatggcttcggataacaggtttcggcagaga
agcagggcagggatgggtgattccaagccccagtatgaatctcttcaggaaaaattaaaa
gcccagtcaggtcataactcagctgaaaatttttgtctaaaaataactgcagcctcattg
cagtcacatggtatcccagagggggctgctggaggaatccgaaggtcaattttgtctgaa
ggtggtgtgttgcaggtttattatgtgaaggttttggaaagaggagatacgtatgagatt
attgaacgtagttatcccagtaagcctaaggtgaagaaagatccttcggttatcgagagg
gaggaaattgaaaagactctaaagtattgggttagcatggtgaggaaagacattccaaaa
catcataggaatttcactagcttccaccgaaagcaactgacagatgcaaagcggttctca
gaatcctgtcagagagaggttaaaatgaaggtcagcagatccttgaaattgatgaggggt
gccgcactcagaacacggaaattggctagagacatgctattgttttggaagagagttgac
aaggagatggtggaagtgaggaaacgagaagaaagagaagctgcagaagctttaaagcga
gaacaagaacttcgtgaagcaaagaggcaacaacagaggctcaattttctactgtcgcaa
actgaactttacagccatttcatgcagaataaaacttctcaaacctctgaagcatacaca
gcaggtgatgaaaattctaatgatcaagaaatgctgttgggtccggctggagctctgcct
ggggatgaagatgatcttgaagatgcccaactgagaaatgaagctctgaaagcagctcat
gatgcagtttcaaagcagaaacagatgacaagcgcatttgataccgaatgcttgaagcta
cggcagacctcagaaatagaagcctctctgcaagatgcgtcagtttcagaatcgagcaac
attgatttattgaacccatcaaccatgcctgtggcatcgacggtgcgaacacctgagtta
ttcaatggttctcttaaagaatatcagctgaaaggtcttcaatggcttgtaaattgctat
gagcagggcttaaatggtattcttgctgatgaaatgggcctggggaagacaattcaagcc
atggcattcttggctcatttagctgaggaaaaaaatatatggggaccttttctcgttgtt
gctcctgcttcagttctgaataactgggctgatgaaatcagccgcttctgccctgatctg
aagactcttccatattggggtgggcttcaagaccgtacagtacttaggaagaacattaac
ccaaagcgtctttaccgaaggaatgctggattccacattctaattaccagttaccaactg
ctagtttctgatgagaaatactttcgccgtgttaagtggcaatatatggtgttggatgaa
gcccaggcaataaaaagttcaaacagcataagatggaagacactgctgagtttcaattgt
cgaaatcgtctgcttctaactggtactccggtacaaaacaatatggctgaactttgggct
ctgctacattttattatgccaaccctatttgatagccatgaacaattcaatgagtggttc
tcaaaaggaattgagagtcatgcggagcatggtgggacattaaatgagcaccagctaaat
cgtttgcatgcaattctgaagcctttcatgctgcggcgggttaagaaggatgtgatctct
gagttgtccgggaaaactgaaatcacagtgcactgtaaattaagttctcgtcagcaagca
ttttatcaggctataaagaataagatatccctggctgagttgtttgatggaaatcgcgga
catctcaatgagaaaaagcttatgaatttgatgaacattgttatccagctgaggaaggta
tgcaatcatccggagttgtttgagagaaatgagggaagcacatatttccattttggagag
ataccaaattttcttcttcctccaccttttggagaattggaagacatttgttattccggt
ggtagaaatcccattgtatatgagataccaaaactcgtgtaccaagaagttgtccgtgat
tccaagttgagttattctcgattaggccgagggttgagcagagtgttagttgagaaactt
tttaacatattttctccagaaaatatatgtcgatccacactgcagctggattacagttca
gatggtacttctttacaaagtggaacttttggattttcccgcctcattgatttgtcgcca
gcggaggtttcattcttggcagtggggtcatttatggagagattattgctttttgtcacg
agatcgaatcgggaatgtttgaatggattatcggccatgttgctggaagatgaggattat
ggtgactatactcacattagcaaggaaaaggtgagagctgtcacacggatgttgctggtt
ccatctaaatcagagacaaatgctctaagaaggaaattttcgacaggtgctggggacgtc
cctttcgaggctctaataacatctgatgaggacagacttctatattatattaaacttttg
cattcagtatattctttcatccccaggactagagcacctccgataaatgcccattgttct
gatcgaaactttgcatatatgatgactgaagagtggcatcatccctggcttaaaagattg
ttgacagggtttgctcgaacgtctgactttaatggtccaagaaagccaggaatttctcac
caattaatacaagagattgatgctgacttacctgtttcacagcctgctcttcagcttact
tacaagatatttgggtcctgtccgcccatgcaaccatttgaccctgcaaagatgcttacg
gactctgggaagcttcaaacacttgacatactgctgaaacgtttgcgtgccaaaaaccat
cgcgtgcttctctttgcgcaaatgacgaaaatgttgaacatacttgaggattacatgaac
tatagaaaatataggtaccttaggcttgatggatcttccacgataatggatcgtcgagac
atggtcaatgacttccagcatcggaacgacatatttgtgttcttgctgagcacaagagct
ggtgggcttggaatcaatttgacggctgctgatactgtcatattttatgaaagtgattgg
aatccaacgttggatttacaagcaatggacagagctcaccgtctgggtcaaactaaggat
gtcactgtttatcgcttaatatgtaaagaaacggtggaggaaaaaattttgcagagagct
agtcagaaaagcactgtgcagcagcttgtcatgacaggtggtcatgttcagggtgatctt
ttggctcctgaagatgttgtatcattattgattgatgatactcaactcgaacaaaaattg
aaagaagtttcgcagcaggctaaagatagacagaagaagaaaggtggaacaaagggcata
cgaattgatgcagaaggaggtggtgcatctattgaggattttacaaaccttggatatggt
agtgagtctgagcttcctgaacctgataaaccaaaacctacaaacaaaaagatgtattcg
cagaggaaagctgcaacggacaagaaggggcagcaaaagaattctaaattggtgggttca
tcgtctccgaactcaatgatagtggactatgaacccgatgttcccacacaaaacagcgaa
accctacatcagcaaagatcaaagaggttgaaaagaccgacaaagagcttaaatgaaacc
attgagcctgcttttacagctatcccacctgtatttcaagaccagaatcaaattgcacca
gttccctga
DBGET
integrated database retrieval system
