Primulina eburnea: 140825566
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Entry
140825566 CDS
T11060
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pebu03016
]
140825566
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
140825566
Transfer RNA biogenesis [BR:
pebu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
140825566
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Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
140825566
NCBI-ProteinID:
XP_073043516
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Position
3:4579890..4587911
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AA seq
809 aa
AA seq
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MLNELFNFPSPKLEHMAVRVINGGAIIRFCAASPPFAASICCLNQHRAVQFHSSHRLSIL
GRCHYQLRFGYGGLAIRRWSAQSLVDMVVEELELLRQRGGIRASNKLELKSSEEIIGNKS
GKAVLQKGLLLEFKKDPERVLLAVAQKPDGKKNWMVSDQNGVMTSIKPQQVTFIVPGANN
FDHTEIADFIQRAQDNLDPALLEFAWIELIEKNESITVEALAEMIFGSAEPLESYCAHLL
LSKDDIYFTALEAKGSSYVYGPRPGVQVEELVRRKHAKEAAEKELEEFVKLLKSAKGMPS
NGKPPKSTWTSEDDYLKRIMSLKAYALDDCRNEDEKRTAGMILRAMGLAKTSTAAVNLLI
DIGYFPVHVNLDLLKLNIRTDHPDEILTAAESILSELPDLDKVDRKDLTHLKVYAIDVDE
ADELDDALSATRLQDGRIKIWIHVADPTSLVEAGTVIDKEALKRGTSVFLPTATYPMFPE
KLAMEGMSLKQGKQCKAVSVSVILHSDGSIAEYSVENSIIKPTYMLTYESASELLHLNLE
EEVELRLLSEAAALRLQWRRQQGSVDTSTIETRIKVSNLDDPDPLIKLYVENQADPAMQL
VSEMMILCGEVIATLGSLKKIPLPYRGQPQSSMDTSAFAHLPEGPVRSSAIIKLMRAAEL
DFRKPIRHGILGLPGYVQFTSPIRRYLDLLAHYQVKAFLRGDSPPFSAGQLEGMASMVNM
TTRVVKKLTSSSLRYWIIEYLRRAPKGRKFSALVLRFIKDRVAAILIMDVGLQSSAWVSL
GVHVGDEVKVQVEEACPRDDILTLKEVLT
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgaactcttcaattttccctctcccaagctagaacatatggcggttcgggtg
attaacggcggtgcaataatccgcttctgtgcggcgtctccgccatttgccgcttcgata
tgttgtttaaaccagcacagggctgttcaattccattcctcccatcggctttcgatttta
ggacggtgtcattatcagcttcgatttggctatggaggtcttgcgattcggaggtggtca
gcacagagtttggtggatatggtggtggaagagctcgaattactacgccagcgaggtgga
attcgcgcgtcaaacaaattggaactgaaaagtagtgaagagattattggaaataagtct
gggaaggcggtgctgcagaaaggattgctgcttgaattcaagaaagacccggagagggta
ttactggcagttgcgcagaaaccagatggcaagaagaattggatggtttccgaccagaat
ggtgtcatgacatcaattaagccgcaacaagttactttcattgttcctggtgccaataac
tttgaccacacagagattgctgatttcattcagagagcacaagacaatttggatccagca
ttgctcgagttcgcttggattgagcttattgaaaagaatgaatcaataacagtggaggct
ttggctgagatgatttttggtagtgcggaacctcttgagagctactgtgctcatttgttg
ctttcaaaggacgacatatacttcacagctctggaggctaaaggttcttcttatgtgtac
gggcctcggcctggtgttcaggttgaagaacttgtgcgaaggaagcatgccaaagaggct
gctgagaaggaacttgaagagtttgttaagttattaaagtctgccaagggcatgccttca
aatgggaagcccccaaaatctacatggacgtctgaagatgattatttaaagagaattatg
tctcttaaagcatatgcactagatgattgtaggaatgaagatgaaaaaagaactgctggg
atgatattgagagccatgggattggctaaaacatcgactgcggcagtcaatctacttatc
gatattgggtattttccagtgcatgtaaatcttgatttgttaaagctaaacattcgcacg
gaccatccagatgagattctgacagctgcggaaagtattctgtcagagttaccggacctg
gataaggttgacagaaaagaccttacgcatctgaaagtgtatgcaatagatgttgatgaa
gctgatgagctcgatgatgcattaagtgcaacaaggctgcaagacggccgtattaagata
tggatccatgttgcggaccctactagcttagttgaagctgggactgtgatagacaaagag
gcattgaagaggggaacttctgtgtttttacccactgctacatatcccatgtttcctgag
aaattggccatggaaggaatgagcctgaagcaaggaaagcaatgcaaagcagtgtcagtt
tctgttattctgcattctgatggcagtatagcagaatattcagtggaaaactcaattatc
aaaccaacatatatgctaacatatgagagtgcgtcagaacttctacatctgaacctggaa
gaggaggttgaacttcgacttctttctgaggctgctgcactccggttacaatggcgtaga
caacagggttcagtagacacatctacaatagagaccagaataaaagtttctaatctagat
gatccagatcccttgatcaagctgtatgtggaaaatcaggcagatcctgcaatgcagctt
gtgtctgagatgatgatactttgtggcgaagttatagccactcttggttctttgaaaaaa
attcctttaccatatcgagggcaacctcaatcaagtatggatacatctgcttttgctcat
cttcctgaaggccctgtcaggagttctgctataatcaaacttatgcgagctgctgaactg
gattttaggaagcctatacggcatggaattttaggacttccgggctatgttcaatttacg
tctccgatacgcagatatttggatctcctggcgcactaccaggtaaaagcttttctcagg
ggagattctcctcccttctcagcaggacaattggaagggatggcttctatggtaaacatg
actactagggtcgtaaagaaactcaccagtagcagcctgcgatattggataatagaatat
ttgagaagagcaccaaaaggcagaaagttctcggctttggttctgagattcatcaaagat
agagtagcagcaatacttataatggacgttggacttcaatcttctgcctgggtatccctt
ggtgtacatgttggtgatgaagtgaaagttcaggtggaagaagcatgtcctcgcgatgat
attcttactctcaaggaggttctaacatga
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