KEGG   Primulina eburnea: 140825720
Entry
140825720         CDS       T11060                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
pebu  Primulina eburnea
Pathway
pebu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140825720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pebu03041]
    140825720
Spliceosome [BR:pebu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    140825720
 Complex B
    140825720
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C RRM_7 DUF8489 RRM_occluded RSRP RRM_PARP14_3 DUF4154
Other DBs
NCBI-GeneID: 140825720
NCBI-ProteinID: XP_073043754
LinkDB
Position
1:7696830..7702350
AA seq 568 aa
MLTQEIAGNYYSPPPMDSPEAASLQQPAHKGSSSPNSRHTSLDHEKDRDRESARSRDKDR
ERGRDKGRDRDREREREKDRDRDKDRYRDRDHNHRDRHKDRSERRERERTRDRIDDDDYY
KSRDYERRRDYDKDRDDKPKHRSRSRSKPRSDHRSGSRSPSRSKSKRTSGFDMAPPVALL
PNSAAANAAGQILGTTPAMPGMFPNMLPLAPGQFGALPLMPVQAMTQQATRHARRVYVGG
LPPSANEQSVATYFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMAL
DGIMFEGAPVKVRRPSDYNPSLAATLGSSQPSPNLNLSAVGLTPGSAGGLEGPDRIFVGG
LPYYFTEGQVRELLESFGHLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKM
GDKTLTVRRANQGTAQPNPEQECVLLHAQQQIALQKLMLQPSVLATKVLCLTEVVNAEEL
NDDDDYEDILEDMKIECGKFGTLVNVIIPRPPPNNEPAPGVGKVFLEYEDIEGATKARQG
LHGRKFGGKEVVAVFYPENKFSEGVYDG
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgctgactcaggaaattgctgggaactactactctccacctcctatggactcaccagaa
gctgcaagcttgcagcaaccagctcacaaaggatcatcgagcccaaattccaggcatact
tctctcgaccatgaaaaagatagagatagggagtccgccagaagcagggataaggatcgg
gaaagaggtcgtgataagggccgagacagggacagggagagagagagggagaaggacagg
gacagagacaaagatagataccgtgatcgtgatcataatcatcgagaccgtcacaaggat
cggagtgagagaagggagagggagagaaccagggatcgaattgatgatgatgactattat
aaaagtcgagactacgagaggcggagagactatgacaaagatagggatgacaaacccaag
cataggtcccggtctcgctccaagcctagatcggaccatagatcagggtcccgatctcct
tcacggtctaaaagcaaaaggaccagtggctttgacatggcacctcctgttgcattgctt
ccgaattctgctgcggctaatgcagcaggtcagattcttgggaccactccggccatgcct
ggaatgtttcccaatatgttacctttggcacctgggcagtttggagcactccccctaatg
cccgttcaggcaatgactcagcaggctaccagacatgctagacgagtctatgttggtgga
cttcctccatctgcgaatgaacagtctgtggcaacctactttagtcatgttatgtcagca
attggaggaaacaccgctggtccaggggatgctgttgtaaacgtttacatcaaccatgag
aagaagtttgcttttgtggaaatgagatctgtcgaagaggctagtaatgctatggcatta
gatggaataatgtttgagggtgctcctgttaaagtgagaagacccagtgattacaaccct
tctttggctgcgactctaggctctagtcaacctagccccaatctgaatctctcagctgtt
gggttgacaccaggatctgctgggggtcttgagggtcctgaccgtatatttgttggtggg
ttaccatattattttacagaagggcaggttagggagctgctggagtctttcggacatctc
cgaggctttgatctggttaaagatagagaaacagggaattccaaaggctatgcattttgt
gtttaccaggatttatcagttacagatattgcctgtgcagcacttaatgggataaaaatg
ggcgataaaacgcttactgttaggcgtgctaaccagggtacagctcaacctaatcctgaa
caagagtgtgtgttattgcacgcccaacaacaaatagcattgcagaaactcatgttacaa
cccagtgtactggcaacaaaggttctgtgccttacggaggtggttaatgcagaggagctc
aatgatgacgacgactatgaagatatcttagaggacatgaaaattgagtgtggaaaattt
ggtactcttgtaaatgtgatcatcccacgcccaccccccaacaatgaaccagctccaggt
gttggaaaggtgtttttggagtacgaggacattgaaggtgctacgaaagctcgacaagga
ctgcacggaagaaaattcgggggaaaagaagttgtggcagttttctatccggagaacaag
ttttccgagggtgtgtatgatggctag

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