Primulina eburnea: 140825781
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Entry
140825781 CDS
T11060
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140825781
09123 Folding, sorting and degradation
03018 RNA degradation
140825781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140825781
03041 Spliceosome [BR:
pebu03041
]
140825781
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140825781
mRNA degradation factors
5'-3' decay
Lsm complex
140825781
Spliceosome [BR:
pebu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140825781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
M11L
Motif
Other DBs
NCBI-GeneID:
140825781
NCBI-ProteinID:
XP_073043837
LinkDB
All DBs
Position
3:6243710..6246660
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AA seq
98 aa
AA seq
DB search
MSLGLGLESLVDQLISVITNDGRNIVGILKGFDQATNMILDESHERVYSTKEGVQQIVLG
LYIIRGDNISVVGELDEDLEARLDLTELRAHPLKPVVH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttggcctcggacttgagtctcttgttgatcaattaatttcggtaatcacaaat
gatgggagaaatatcgtgggaattttaaaaggttttgatcaagctaccaacatgattctt
gatgagtctcatgaacgagtatactcgaccaaggaaggtgtgcagcaaattgtgctgggt
ctctacattataaggggtgataacataagcgtcgttggagaattagacgaagatctggag
gctcgattggacttgacggaactacgagctcatcctcttaagccggttgtccattaa
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