KEGG   Primulina eburnea: 140825858
Entry
140825858         CDS       T11060                                 
Name
(RefSeq) WD repeat-containing protein VIP3
  KO
K12602  WD repeat-containing protein 61
Organism
pebu  Primulina eburnea
Pathway
pebu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    140825858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pebu03019]
    140825858
Messenger RNA biogenesis [BR:pebu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     140825858
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EML DSE1_N Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_WDR41 ASA1 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 eIF2A Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SPT8 CFAP251_N Beta-prop_ACSF4 Tricorn_2nd Beta-prop_IFT140_1st Beta-prop_WDR11_1st TRM82_WD CFAP43_N WD40_like PD40 Beta-prop_pof12 Beta-prop_LRRK2 Beta-prop_MIP2 Beta-prop_IFT80_2nd PALB2_WD40
Other DBs
NCBI-GeneID: 140825858
NCBI-ProteinID: XP_073043959
LinkDB
Position
3:complement(7053424..7056700)
AA seq 323 aa
MKLAPLGSVQNAHDDSLWTAAWVPATEDSAALLLTGSLDETVRLWNPEGPEKLLTNTGHC
LGVVSVAAHPSGRIAASASIDSFIRVFDVATNNTIATLEAPPSEVWQLKFNPQGTTLAAA
GGGSASVKLWDTAEWQLIATLSVPRPEGLKPSEKSGNKKFTLSVAWSPDGRQIACGSMDG
TISVFDVARAKFLHHLEGHCMPVRSLVYSSAPLDSRVLFSASDDGHIHVYDAEAKSLITS
MSGHSSWVLSVDVSPDGVAIATGSSDKTVRLWDLKMRAATQILTSHTDQVWAVAFGPPSR
TDVRSCLLASVSDDKSLSFYKYS
NT seq 972 nt   +upstreamnt  +downstreamnt
atgaaactagcgccactcggctccgtccagaatgctcacgacgactccctgtggacggcg
gcatgggttccggcgactgaagattcggcggcgcttctactgacggggtcgctggacgag
acggtgaggctgtggaatccggaaggccctgagaagctgctgacgaataccgggcactgc
ctcggagtcgtttctgtggcggctcacccgtccggcagaattgcggcatccgcctccatc
gatagctttattcgagtcttcgatgtcgccactaacaatactatagccactctcgaggct
cccccatccgaagtttggcaactgaagttcaatccccagggcacaacgctagcagctgct
ggaggtggtagtgcttcagtgaagctttgggatactgcagaatggcagttaattgctacg
ttatcagttcctcgaccagaaggcttgaaaccctccgagaaaagtggcaataagaagttt
accctctcggtggcatggagccctgatggtagacaaatcgcttgtggctcaatggatggc
accatctctgtttttgatgtggctcgtgcaaaattcttacaccacttagaaggccattgc
atgccagttcgcagtctggtgtactcatcagcacctctcgattcgagagttctcttctcc
gcctcagacgatggccacattcacgtttatgatgctgaggcaaaaagtttgattacatca
atgtcagggcactctagttgggttctgagtgtcgacgtgtccccagatggagtggcaatt
gctacaggatcgagtgacaaaaccgtacggctctgggatctcaaaatgagagcagctacc
cagatattaaccagccacaccgaccaggtatgggccgtggcatttggaccaccttcgcgt
acagatgtaagatcttgtctgctcgcgagtgtgtccgacgacaaaagcttatccttctat
aaatattcttga

DBGET integrated database retrieval system