Primulina eburnea: 140826031
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Entry
140826031 CDS
T11060
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140826031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140826031
03016 Transfer RNA biogenesis [BR:
pebu03016
]
140826031
Enzymes [BR:
pebu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
140826031
Messenger RNA biogenesis [BR:
pebu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
140826031
Transfer RNA biogenesis [BR:
pebu03016
]
Prokaryotic type
tRNA degradation factors
140826031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
140826031
NCBI-ProteinID:
XP_073044225
LinkDB
All DBs
Position
3:complement(8617712..8631106)
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AA seq
967 aa
AA seq
DB search
MLAARPNSTFHAPPFHSKLTTSKKAPIFSQFSTLNCFNSSVNRHFASILLPNSVSRIFRT
RKSRNGGRKWTSTLFTRLRIEASLTAEDNARIEEAPLPLQPSAPYSIKIPVGDRHIFVET
GHMGRQASGAVTVTDGETIIYTTVCVAEDPSEPSDFFPLWVNYQEKFSAAGRTSGGFFKR
EGKTKDREVLICRLIDRPIRPTMLKGFYHETQILSWVLSYDGLHPPDSLAITAAGIAVAL
SEVPNSKAIAGVRIGIIDDKFVVNPTTKEIENSKLDLMLAGTDSAIFMIEGYCDFLPEEK
LLQAVELGQNAVRTICKEVETLVKMCGKPKMLDAIKLPPPELYEYVEEIAGDELVQALQI
KSKIPRKKALSSLEAKVLSIFTEKGFVSKTEAVVTSEVVQDLLDDEEEDEEFVVDGEVDE
GDVHIKPVSKKPTPLLYSEVDVKLVFKEVSSKFLRRCIVEGGKRSDGRKPEDLRLINSRC
GLLPRAHGSALFTRGETQSLAVVTLGDKQMAQRLDNLVDEDEFKRFYLQYSFPPSCVGEV
GRQGAPSRREIGHGMLAERALEPILPSEDHFPYTIRVESTITESNGSSSMASVCGGCLAL
QDAGVPVKSSISGIAMGMVLNTEEFGGDGIPLILSDITGGEDASGDMDFKVAGNEDGVTA
FQMDIKVGGITIPVMKEALLQAREGRKQILAEMSKCFPPPSKKLSKYAPIIHIMKVKPDR
VNLIIGSGGKKVKSIIEETGVESIETQDNGIVKISSKDSLSLEKSKAIISNLTMVPTVGD
IYRNCEIKSIAPYGVFVEISPGREGLCHISELTTGWLAKAEDAVKVGDTIDVKLIEINGK
GQLRLSRRALLPDSNTENMGTKQRTVDISEESTEKGKQNSVTRAVEVENAEPSNELSVDI
KVRRSSKSKPVEANTLMEDKFVKELVSSAKDELESDRNRPKKSSYKPTISISSKNETTVV
NGEAESG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcggcacgccccaattcaaccttccacgccccaccttttcattccaagttgacc
acttccaagaaagctccaatattttctcaattttctactttgaattgctttaattcctcg
gttaatcgtcattttgcttccattttgttgccgaattccgtatctcgaattttcagaacg
agaaaatcaagaaacgggggcaggaagtggacgagtacattgtttactcgattaaggatt
gaagcttctttaacggcggaagataatgctcgcattgaagaggctccgttaccgctgcaa
ccctcggctccttattccatcaaaatcccagtcggcgatcgtcatatatttgttgagacc
ggtcatatggggagacaagctagtggagctgttaccgttacagatggagaaaccatcatc
tacacaactgtttgtgtggctgaggatcctagtgagccttctgattttttccctctttgg
gtaaattatcaagaaaaattttcggcagctggtcgaaccagtggaggattttttaaacga
gagggaaagaccaaggatcgtgaggttctcatttgccgactcatagatagacctattcgc
ccaacgatgctcaagggattttatcatgaaacacagatattatcttgggtattaagttat
gatggtttacaccccccagattctttggcaataacagcagctggaattgcagtagctctt
tcagaggtgccaaattctaaagctattgctggggtacgaattggtattattgacgacaag
tttgttgtgaatccaactaccaaggagatagaaaactctaagctggacttgatgctagca
gggacagatagtgcaatatttatgatagagggttattgcgacttccttccagaagagaag
ttgttgcaagctgtagaacttggacagaatgcagtgcggactatttgcaaagaggtggaa
accttggtgaagatgtgcgggaaaccaaaaatgcttgacgcaatcaaactaccccctcct
gagctgtatgagtatgtcgaagaaattgcaggcgatgaattagttcaagctcttcaaatt
aagagcaaaatccctagaaagaaggcgttatcatctttggaagcaaaggtgttgagcata
tttacagaaaagggatttgttagtaaaacagaagctgttgttactagtgaagtggtccag
gacttgcttgatgacgaagaagaggatgaagagtttgtagtggacggtgaagttgatgaa
ggtgatgttcatatcaagccagtctcaaaaaaacccacccccttgctttactctgaggta
gatgtgaagcttgttttcaaagaagtttcatccaagtttttgaggaggtgtattgtggag
ggaggaaaaagaagtgatggcagaaaaccagaggatttacggcttattaattcacgttgc
ggattgcttcctagagctcatggaagtgctctctttactcgtggcgaaacacagtcatta
gctgttgttacgcttggtgataaacaaatggcacagaggctagacaaccttgtggatgaa
gatgagttcaagagattctatcttcagtactcttttcctccctcatgtgttggagaagtt
ggccgtcaaggagcaccatctagaagagagattggccatggaatgcttgcggagagagct
ctggagcctatattaccttcagaagatcacttcccttacactattcgtgttgagagtacc
ataacagaaagcaatggctcttcaagtatggcctctgtgtgtggggggtgcttagcttta
caagatgctggcgttccagtcaagagttcgatttctggaatagcaatgggtatggtcctg
aacactgaagagtttggaggagatggtattccacttatcctctctgacataacagggggt
gaagatgcttcaggagatatggatttcaaggttgctggaaacgaagatggggttactgca
ttccagatggacataaaggtgggaggaattactataccagtcatgaaagaagctctcctg
caagcgagagagggtcgaaagcaaattcttgcggagatgtcaaaatgctttcctcctcct
tcgaagaaactctccaaatatgctcctataattcatattatgaaggtgaaaccagatagg
gttaaccttatcattggttcaggtgggaaaaaagtgaaaagcataattgaggagactgga
gtcgagtctatagagactcaagataatggaattgttaagatatcatctaaagattcgttg
agtttggagaagtctaaagccattattagcaacctcactatggttccaactgttggcgac
atttacaggaactgcgagatcaaatctattgctccatatggagtttttgtggagatttca
cctggccgagagggactatgtcacattagtgaattgaccacaggctggttggcaaaggca
gaagatgctgtcaaagttggagatactattgatgtaaagctcattgagatcaatggaaaa
ggtcaacttcggttgagccggcgtgcattacttccagattctaacactgagaatatgggc
acaaagcaacgtactgttgacattagtgaagaaagtaccgagaagggtaaacaaaacagt
gtcacgagggccgtggaagttgaaaatgctgaaccatccaatgaattgagtgttgatatt
aaagtcaggaggtcctccaaaagtaagccggtagaggccaataccctcatggaggataag
tttgtcaaggaattggtgagttcggcaaaagatgaacttgaatctgacagaaataggcca
aagaaaagcagctacaaacctaccatcagtatttccagcaagaatgaaaccacagtagta
aatggagaagccgaaagtggataa
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