Primulina eburnea: 140826286
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Entry
140826286 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140826286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140826286
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140826286
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140826286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
140826286
NCBI-ProteinID:
XP_073044602
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All DBs
Position
3:complement(10797678..10807457)
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AA seq
866 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVSELESQIDSFEAEVEGLSVKKGKSRPPRLTHLETSISRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQENFDEFSDVDELYNSLPLDKVES
LEDLVTVGPSNLVKGVGASGTVLSLKSSLGATASTALTTLSSTPQVASAPDQVEETASQD
SNSDAVARTPPPKSNNLSSSAPQTPPAASHATLGVATASSLLTESSATKEEDISSFSGGK
SSPALSETGLRPISRGGLPSQPSSTIGLSASSTISNNGALSAMPLASEIGKLNILVSDDR
SASTGMTQSIASPLSNRVILPQASKASDGLGASDLVIAGDSAIMGSRVFTSPVVPGMQWR
PGSSFQNQNETGQFRGRTEIAPDQREKFLQRFQQVQQQGQTNILGMTSLTGGKQYSAQQQ
NPLLTQFNAQSSSLSPQLGLGIGVQSSVLNGVASSASQQPPSAIHQSVNQQTMIPTTSRE
AESGLAKAEELLQQQPITEDSSVDSATNPGLGKSLVQEDEIKASHTLDTSAAVSISEPSQ
VTRDIDLSPGQPLQPSASTGSLGVIGRRSVSDLGAIGDNITSSTANSGGMHDQLYNLQML
EGAFHRLPQPKDSERAKSYTPKHPAVTPPSYPQVQAPIVNNPAFWERLGSDTYGTDTLFF
SFYYQQNTYQQYLAARELKKQSWRYHRKYNTWFQRHEEPKVATDDFEQGTYVYFDFHIAN
EEQHGWCQRIKTDFSFEYNYLEDELN
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggagctagtcggaagttacagggagagatagatcgcgttctgaagaaagttcaggag
ggcgtcgatgtatttgatagcatttggaataaggtttatgatactgataatgcaaatcag
aaggaaaaatttgaggctgacttgaagaaggagataaagaagttgcagcgatacagagat
cagatcaagacttggatacaatctagcgaaataaaggataagaaggttagtgcctcttat
gagcaagctctagtcgacgctcgcaagcttattgagcgtgagatggaacgatttaaaatt
tgtgagaaagaaactaagacaaaagcattctccaaagaaggattgggccaacaacccaaa
acggatcccaaagaaaaggctaaatcagagaccagggattggttgaataatgtggttagt
gaactggaaagtcaaatagatagctttgaagcggaagtagagggactttctgttaagaaa
gggaagtcaaggcctcccagactgacacatctagagacatccatttctcggcataaggct
catattatgaagttagaattgattctaaggctattggacaatgacgaattgagtccagaa
caagtcaacgatgtaaaggatttcctggatgactatgtggaaagaaatcaggagaacttt
gacgaatttagtgatgtcgatgaactttacaattccttgcctttggacaaggtggaatct
cttgaagatctagtgacagttggtccttctaatcttgtgaagggtgtcggtgcctctggt
acggttttaagtttgaaatcttctttgggtgcaacagcctctacagctctgacaacatta
tcttccacaccacaggttgcttccgctccagaccaagtggaagaaacagcttctcaagac
agtaattcagatgcagttgcaagaaccccacctcctaagagtaataatcttagttcttct
gcaccacaaacaccaccagcggcaagccatgctactctaggtgttgccactgcttcatca
ttattaactgagtcaagtgccaccaaagaagaggatatcagtagcttttctggtggcaaa
tcatctcctgctctatccgaaactgggttaaggcccatcagtagaggcggtcttcctagt
caaccatcttccacaattggtcttagtgctagcagtacgatttctaacaacggagccctt
agtgccatgccgttggcttcagaaattggaaaattaaatattttggtatctgatgaccga
tcagcaagtactggaatgacacagtccattgcatctcctctaagtaatagagtaatcttg
ccacaagcttccaaggcaagtgatggacttggcgcaagcgatttagtaattgccggtgat
tctgcaataatgggtagcagagttttcacctcccctgtggttcctggtatgcaatggagg
cctggaagttcctttcaaaaccaaaatgaaacggggcagtttcgtggacgaactgagatt
gctcctgaccaaagggagaagtttctacaaagatttcagcaggtgcagcagcagggccag
actaacattctcggtatgacctctcttactggagggaaacaatactctgcccagcagcaa
aatccgctcttgacgcagtttaatgctcaaagctcatctctctcgcctcaactgggattg
ggaattggagtccaaagttccgtactcaatggtgttgcatcatctgcttcacagcagcca
ccgagcgcaatccaccaatcagttaatcagcagaccatgatacccacgacatctagggag
gctgaaagtggtcttgcaaaagctgaggagttactgcagcaacagcccataactgaagat
tcatcagtggattctgctacaaatcctggacttggaaagagtcttgtgcaagaggatgaa
attaaggcttcccacaccttggatacctcagctgctgtctcaatttctgaaccttcccag
gtgacgagggatattgacctatctcccgggcagccgttgcaacccagtgcatctactgga
agtcttggtgtgattggtcgacgaagtgtatctgatcttggtgccattggtgataacata
acttcatcaactgcaaattctggagggatgcatgatcaattgtataatttgcagatgctt
gagggtgctttccataggcttcctcaacccaaagactctgagcgtgcgaagagctatact
ccaaaacatcctgctgttaccccaccgagctatcctcaagttcaagcaccaatagttaat
aatcctgccttttgggaacggcttggatctgatacttatggcactgatactctctttttt
tcattttactaccagcagaacacgtaccaacaatatttggcggccagagaattgaaaaaa
caatcttggagataccacagaaagtataacacatggttccaacgacatgaagagccaaaa
gtcgccacagatgattttgaacaggggacatatgtgtactttgatttccatatagccaat
gaagaacagcacggatggtgtcagagaattaagactgatttctcttttgagtacaattat
cttgaagatgaactaaactaa
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