Primulina eburnea: 140826492
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Entry
140826492 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pebu03036
]
140826492
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
140826492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
C1_1
PHD
DUF7020
Motif
Other DBs
NCBI-GeneID:
140826492
NCBI-ProteinID:
XP_073044923
LinkDB
All DBs
Position
3:complement(12392229..12415305)
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AA seq
1788 aa
AA seq
DB search
MWNSGTGSGDLPCGISLSNTVHSEVAPCLPLPSLPVFCGALDQELRLFDDGKSRWSSNQG
DVAGKIVDLLRNTDVSYLNLKDQSSIQPGASIGNSNLFNEVLRHDPDAFGCVAPGSIEEP
MYRSGLTESTPFERNMPVHSQLLRETGEMRRDADQVQADSVGTSKHQQDHYVDKKVLNSS
RKPKVKQKGKDGFLPGTCPDSRDYQDTAIADFCEMLEELCGRAEVFGEDRDEVELIPLPF
ADLKALTNQILSMRAKKILHMVHVDLLSRILKVLDHQIHRAEGLSINYNYHLDADVVSSI
YCSLESIHGALAIMTHDDMPKLLYKEENIERILDFSRHQILDVMFACDPAYRAMHKPTDI
GAIDDEEDEEAADFGSSSKKRRTSKSVKEKKSTTNKGLSVVNTVTQKLCTILSFLKQFLS
IERFSDSCILQLVRTSLQTLLVDNIPLLQLKAISLIGGIYYMYTQHRSYVMDETVQIILK
SPLSKRVPRAYHLPDEEQRQIQLVTALFIQMVQYSANLPEVVRSENPLVEVSVDPGYPAK
CYEAITESCCLFWTRILQRLASTKSQDASELKMIMENLVMDLLTTLNLPEYPASAAILEV
LCVLLLQNAGLKSKDITARIMAIDLLGTIAARLKHDAVLCRNDKFWILQEFINSEIVDPS
YEEDACSVCKGAISERSLFVCQGCQRRFHVDCMEGMENEVHNRNSDCQICLCERQLLILK
TYCVSQDKDDQKKNRNQSKKSSRHDTVTIQDIVQQMLLNYLQDVRSEDDTHLFARWFYLC
LWYKDDHPASEQKIYYYLTRLKSRAIVRESSSFSSSLTRDSVKKLALALGQNSSFARGFD
KILQVLLASLRDNSPTIRSKAMRAVSIIVEADPEVLGDKFVHLAVEGRFCDSAISVRESA
LELVGRHIASHPDVGLKYFEKVAERIKDTGISVRKRAIKIIKDMCTSDTGFSLFSAACFE
IISRINDDESSVQDLVCKTFFEFWFEEHSGMQAHSFKDGSCVPLEVAKKTEQIVEMLRRM
SSHKPLVTVIKRNLSLDFFPQSAKAAGINPVLLASVRRRCELMCKCLLEKVLQVTEVSSE
EGEELMLPYALLLHAFCLADPTLCVPSSDPSQFVVTLQPYLKSQSDNRVTAQLLESIIFL
IDSVLPLLRKLPQTVCEELEQDLKQMIVRHSFLTVVHACIKCLCSVGKIAGKGASVVEYL
IQLFYKRLDALGFDNKQQVGRSLFCLGLLIRYSSSLLAASSSNTRMVDVTSSVNLFKKYL
QAEDFIIKVRSLQALGYVLIARPEFMLQKDVGKILEATLSSDTDDRLKMQSLQNMYEYLL
HAESQLESDKASKNEVGHSIDGVQSVPVAAGAGDTNICGGIVQLYWDNILGRCLDVNEQV
RQAALKIVEVVLRQGLVHPITCVPYLIALETDPQEVNSKLAHHLLMNMNEKYPAFFESRL
GDGLQLSFMFIHSMNDAMAEISNHKVHHSVKGRPDAGTSAYARLGVSRIYKLIRTNRVSR
NRFMSSVVRKFEMPRWNNYVTPFLMYCTEILALLPFTAPDEPLYLIYTINRLVQVRAGIL
ESNMKDFLHSLEGIYPKGNGNGIVQSDQTIQYVSERSMYIDGNHKISEEIPGRHLSGDPQ
SKNSDTMEDXYSMPKIDLQKIQADCLASGAIQLLLKLKRHLKIVFGLDDARCQAYSPNEP
PKPGESLLRQNVSFNISDVNIDPPNTNEDFLRRYQDFKNALKEDTVDYSTYTANIKRKRP
PPRRGGKASRMADAEDDDDDYEDENWTNGVNRINRNGRKGGVRTRQRC
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattccggaaccggaagtggtgatctcccctgtggaataagcctctccaataca
gtccactccgaggtggcgccgtgcttgccgttgccgtcgcttcctgtgttctgcggcgca
ctggatcaggaactccgactgtttgatgacgggaagtccaggtggtcgtctaaccaaggt
gatgttgctggaaagattgttgatctcctccggaacactgatgttagttacctgaatctc
aaagaccaatcaagcattcaaccaggtgcctctattgggaactctaaccttttcaatgaa
gttttgaggcatgatcctgatgcatttgggtgtgttgctccaggttctatcgaggagcca
atgtatagaagtggtttaactgaatcaactccctttgagcggaacatgcccgtgcacagt
cagttgctgagagagactggtgaaatgaggagagatgccgaccaagttcaggcagactct
gttggaactagcaaacaccagcaagaccattatgttgacaaaaaagttttaaattcttct
agaaagccaaaagtgaaacagaaaggaaaagatggttttttacctgggacttgtcctgat
tcccgtgactatcaagacacagctattgcagacttttgtgaaatgttggaggaattatgt
ggcagagcagaagtttttggcgaggatcgagatgaagttgaattgataccattgcccttt
gctgatctaaaggcacttacgaatcaaattctgtccatgcgagccaaaaaaattctccat
atggtgcatgtagatcttctttcaaggatattgaaggtcttagatcaccagattcaccga
gcagaaggactatcaataaattataattatcatctggatgctgacgttgtatcatccatt
tactgctctctcgagtcaatccatggagctttagctattatgactcatgacgatatgcct
aaactgctttacaaagaagagaatattgaaagaatcctggatttctcaaggcatcaaatt
ttggatgttatgtttgcttgtgatccagcataccgtgctatgcataagccaactgatatc
ggagccattgatgatgaagaagatgaagaagcagctgattttggttcttctagtaaaaaa
agacgaacctcgaagagtgtaaaagaaaagaaatccacaacaaacaaggggctttctgta
gtgaatactgtaactcagaagttgtgcactattcttagttttctaaaacagtttctgtca
atagagcgcttttctgatagttgcattctccagctcgtgagaactagtttgcagacactt
ttggttgataacatcccacttttgcagctgaaagcaatcagtttaattggtgggatatat
tacatgtatactcagcatagatcttatgtgatggatgaaactgttcaaatcattctaaag
tcaccactctctaagcgagtaccaagagcctatcatcttcccgatgaagagcagagacaa
attcaattagtcacagctctgttcattcaaatggttcagtatagtgccaatcttcctgaa
gttgttaggtccgaaaatccattagtggaggtttcagttgaccctggataccctgccaaa
tgctacgaggcaattacggaatcttgctgcctcttttggactcgaattcttcagagactt
gccagcacaaaaagtcaggatgcatctgagctgaagatgataatggaaaatcttgtcatg
gatttactcactactctgaacttaccagagtatcctgcctcggctgctattctagaggtt
ctttgcgtgttactacttcaaaatgctgggctgaaatctaaagatattacagctcggata
atggccattgacctactgggtacaattgctgcaaggttaaagcacgatgctgtcctgtgt
aggaatgacaaattttggatcttgcaggagttcattaatagtgaaattgttgatccaagt
tatgaagaggatgcatgctctgtttgtaagggtgcaataagtgaaaggtctttatttgtg
tgtcaaggttgtcagagaagatttcatgttgattgtatggaaggaatggagaatgaagtt
cataatcgaaactcagattgccagatctgtctgtgcgagagacaacttcttatcttgaaa
acatactgtgtgtcccaggacaaggacgaccaaaaaaagaatcgaaatcagtcgaaaaag
tcttctagacatgacactgtgacaatacaggatattgttcaacaaatgcttctcaattat
ctgcaggatgtgcggtccgaagatgacacacacctctttgcacgatggttttatctttgc
ctatggtataaagatgaccaccctgcttccgaacaaaaaatctactactacctcactagg
ctaaaatcaagagcaattgtgcgcgagtcttcttcattttcatcctccctgacacgggat
tcagttaaaaagttggctttggcattaggacaaaatagttctttcgctagagggtttgac
aagattcttcaagtgctcctggcaagtctaagggacaactcacccacgattcgttctaaa
gcaatgcgagcggttagtatcattgtagaagctgatccagaggttttgggtgataagttt
gtccacttggctgttgaaggaaggttttgtgactctgccatatctgtcagagaatctgct
cttgagcttgttggtcgccatattgcatcacatcctgatgttggtctaaagtattttgag
aaggtagcggagagaatcaaggatacagggattagtgtgcgaaaacgtgctatcaaaatc
atcaaggatatgtgtacctctgacactggattttcactattttccgctgcttgctttgaa
ataatatctcgcatcaatgatgatgaatccagcgtacaggaccttgtctgcaagactttt
tttgaattttggtttgaggagcattcaggcatgcaggcccattcatttaaagatggaagt
tgtgtcccattggaggtggctaagaagacggaacaaattgtagagatgctgagaaggatg
tctagtcataaaccacttgttactgttattaaaagaaacttatcccttgatttctttcca
caatcagccaaagctgctggaataaatcccgtattacttgcttcagtacgtagacgctgt
gagttgatgtgcaagtgtttgttggaaaaagtattgcaggttactgaagtaagtagtgag
gaaggagaagagctcatgctaccatatgctttactattgcatgccttttgtttggcggat
cctactctatgcgtgccatcttctgatccttctcagtttgtggtcaccctacagccatat
ctgaaaagtcagtccgacaatcgggtgactgcccagctattggagagcataatattttta
atcgattctgtcttgcctttgttgcgcaagcttcctcaaactgtttgcgaagaacttgaa
caagatctaaagcaaatgattgttcgacattctttcctgacagttgtccatgcttgcatc
aagtgtttgtgctccgtgggaaagatagcaggaaaaggggcaagtgtggttgaatatctt
attcagttgttctataaacgcctggatgccttgggatttgataacaagcagcaagtaggt
cggtctcttttttgcctggggttgttaatacgctatagtagttctctgttggctgcatct
tcttccaacacaaggatggtggatgtcacaagcagtgttaacttgtttaaaaagtatctt
caggctgaagatttcatcattaaggtccgctcgttacaggccttaggatatgttttaatt
gctcggcctgaatttatgttgcaaaaggatgttggtaaaattttggaggctacactttcc
tctgatactgatgatcgtctgaagatgcaatcattacagaacatgtatgaataccttctg
catgcggaaagtcaactggaatctgataaagctagtaaaaatgaagttggccattcgatt
gatggtgtccaaagtgtgcctgttgctgcaggtgctggtgatactaacatatgtggtggc
atagttcagctgtattgggataacatcctggggagatgtttggatgtgaatgaacaagtg
cgccaagcagctctaaagattgtggaagttgtgttgcgtcaaggtcttgtacatccaatt
acttgtgttccatatcttattgctcttgaaacagatcctcaggaggttaactcaaagctg
gctcatcacctgctgatgaatatgaatgaaaagtatccagcttttttcgaaagccgtctg
ggagatggacttcagttgtcgtttatgttcatacatagcatgaatgatgctatggcagaa
atttcaaaccataaagttcatcacagtgtgaagggaaggcctgatgctggcacttcagct
tatgcccgactaggggtttctcggatttacaagctaattcgcacaaatcgagtttcgaga
aataggtttatgtcttcagttgttcgcaagtttgaaatgcctaggtggaataattacgtt
acacctttcctcatgtactgtacagaaattcttgctttgttaccttttaccgcccctgat
gagcctctttatctgatatacactataaaccgattggtacaagttcgagctgggatatta
gaatcaaacatgaaggatttcttgcattccttagaaggaatttatccaaaaggtaatgga
aatgggatagttcagtctgatcaaactattcaatatgtcagcgaaagatccatgtacatt
gatgggaatcacaaaatatctgaagagattccgggtcgtcatttatctggagatcctcag
tccaagaattcagatactatggaagatntctatagcatgccaaaaattgatttacagaaa
attcaggccgattgtctggcaagtggtgcaatccaacttcttttgaagctgaaacggcat
cttaagattgttttcggccttgatgatgcccgctgccaggcatactcaccaaatgaaccc
cctaaacccggggagagtttgttgcggcagaacgtttcatttaatattagcgacgtaaac
atagacccacctaacaccaatgaagattttttgaggaggtatcaggatttcaagaatgca
ttgaaagaagatactgttgattactcaacctacactgccaacatcaaaaggaaacggccc
cctccaagaagaggtgggaaggccagccgaatggcagatgccgaagatgatgatgatgac
tacgaggatgaaaattggactaatggagtgaacaggataaataggaatggcagaaaaggt
ggtgtaagaactaggcaacgctgttag
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integrated database retrieval system
