Primulina eburnea: 140826954
Help
Entry
140826954 CDS
T11060
Name
(RefSeq) zinc finger CCCH domain-containing protein 40-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140826954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pebu03041
]
140826954
Spliceosome [BR:
pebu03041
]
Complex B
Other components
Prp19-related factors
140826954
Complex C
140826954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
RRM_YTH1
zf-CCCH_10
zf-CCCH_4
zf-CCCH_3
zf-CCCH
zf-CCCH_PARP12
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
140826954
NCBI-ProteinID:
XP_073045618
LinkDB
All DBs
Position
3:15882890..15887630
Genome browser
AA seq
476 aa
AA seq
DB search
MAHRLLRDAEADGWERTDFPIVCESCLGDNPYVRMTKADYDKECKICSRPFTVFRWRPGR
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREYFAE
EHDRKARAGIDYESSHGKVRPSDTILKLQRTTPYYKRNRAHVCSFFIRGQCTRGPECPYR
HEMPETGELSQQNIKDRYYGINDPVALKLLGKAGEMPSLEPPEDESIRTLYVGGLDARIT
EQDLRDHFYAHGEIESVKMVLQRACAFVTYTTREGTERAAEELANKLVIKGLRLKLLWGK
PQAPKPESEGSDQASQQAAVAHSGLLPRAVISQQQTLQPNDIQNQPPMPYFNIPPLPEQD
RSYYPSMDPQRMGALIPSHEGSSSAAGLGGSYENKSGSDQMQQQAQPYGYSNVPPPNIQF
YPPYHPQYGYMPPPILPPRQQYPQPPYPGPRPPLPHPDGDQPSFNTKPPTGASQLP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcgcataggctgctcagagacgcggaagccgatggatgggagcggactgatttcccg
attgtgtgtgaatcatgcctcggcgacaatccatacgttcgaatgacaaaagcagattat
gacaaggagtgcaagatatgttcgcgaccattcacagtttttagatggaggcctggtcgc
gatgcaagatacaaaaagacggagatttgccaaacttgctgcaagctgaaaaatgtttgt
caagtatgcctgctagatctagaatatggcctgccagttcaagttagagatactgccctc
agtattgattcaaatgatgcgattccaaagagcgacgtaaatagggaatatttcgcagag
gagcatgaccgcaaggcaagagccgggattgattatgaatcttcacatgggaaggtgcgc
cctagcgataccatcttgaaacttcagagaaccactccatactacaagagaaaccgagct
catgtttgcagtttctttattcgaggtcaatgtactagaggtcctgaatgcccttatagg
catgagatgcctgaaactggggagttgtctcaacagaatatcaaagaccgttactatgga
attaacgatccagtggcattgaagttgcttggcaaggctggagaaatgccttctctggag
cctcctgaagatgaaagcattagaaccctgtatgttggtgggcttgatgcaagaattacc
gagcaggatttaagagaccatttctatgcgcatggagaaattgaatccgtaaagatggtt
ctccaacgtgcttgtgcttttgtgacttacacaacaagagaaggcacagagagggccgct
gaagaacttgcaaacaagctagttattaaaggcttgaggctgaagctgctctggggtaaa
ccacaagcaccgaagcctgaatctgaaggctctgaccaagcaagccaacaagcagcagta
gcccacagtggattgttgcctagggcagtcatatcacagcagcaaactcttcagcccaat
gatatacaaaaccagcctcctatgccgtacttcaacattcctccgctgcctgaacaagat
cgatcatattatccttcgatggatccccagagaatgggtgctctcattccatctcatgag
gggtcttccagtgcagctggccttggaggatcatatgaaaataaaagtggttcagatcag
atgcagcaacaagctcagccatatggttactcgaatgtgcctccccccaatattcaattc
tacccgccatatcatccacaatatggatatatgccacctcccatacttccacctcggcaa
caataccctcagccaccttatccagggccgcggcctcctttacctcatcctgatggtgac
cagccatcatttaatacaaaacctccgactggggcgtcccaactaccataa
DBGET
integrated database retrieval system
