Primulina eburnea: 140827159
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Entry
140827159 CDS
T11060
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pebu Primulina eburnea
Pathway
pebu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
140827159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pebu02000
]
140827159
Transporters [BR:
pebu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
140827159
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
nSTAND3
MukB
Motif
Other DBs
NCBI-GeneID:
140827159
NCBI-ProteinID:
XP_073045871
LinkDB
All DBs
Position
3:18214696..18250164
Genome browser
AA seq
1901 aa
AA seq
DB search
MEKNGEKMKTGSSRRQLKAMLRKNWLLKIRHPFITCAEILLPTVVMFLLMAVRMRVDTKL
HPPQPYIRKDMLVEVGKDGKSVPFNQILELLYKNDEYLAFAPDTSETRMMINILSIKFPL
LKLTSRIYKDEEELETYIRSDLYGADDQVKNTTNPKIKGAIVFHDQGPNVFDYSIRLNHT
WAFSGFPDVKSIMDVNGPYVNDLELGVNTIPILQYSFSGFLTLQQVLDSFIIYVEQQRLA
NIDTNNLVLPSESPLSHMLLIPWTQFSPSNIRLVPFPTRAYTDDEFQSIVKKVMGVLYLL
GFLYPISQLISYSVFEKEQKIKEGLYMMGLKDEMFHLSWFLTYALQFGVSSGVITLCTMG
TLFKYSDKTLVFAYFFSFGLSSITLSFLISTFFTRAKTAIAVGTLSFLGAFFPYYTVNDE
AVSMILKVMASFLSPTAFALGSINFADYERAQVGLRWSNIWRDSSGVCFLVCLVMMLVDT
FLYGAVGLCLDKVLHRENKLLYRWRSVLRKQFWRKKNDSKQFSSGSLIKLVGSDSEINDR
QFQRDGYETAVEEISLELKQQESDGRCIHIRGLHKVYDTKKSSCCAVNSLQLVLYENQIL
ALLGHNGAGKSTTMSMLVGLVHPTSGDALVFGRNILTDMDEIRKSLGVCPQYDILFPELT
VKEHLEIFSHLKGVNEDCLENVVIEMAEEVGLADKFNTVVGALSGGMRRKLSLGIALIGD
SKVVILDEPTSGMDPYSMRLTWQLIKRIKKGRIILLTTHSMDEADVLGDRIAIMANGSLK
CCGSSFFLKQKYGVGYTLTLVKTTPTTSAAADIVYRHIPSAICVSEVGNELTFKLPLASS
SSFESMFREIECYVQRSNPTVGTVGYGDSNSLGIESYGISVTTLEEVFLRVAGGDFDITE
CHDNKNYITPDSDVQQHGENHTSNRIIHSKVCKSCIEVIGYMMATMGKASCLFWATTLHI
LKFISMQCCCFCTLSRSTFWKHSKALIIKRAMSARRDQKTIVFQLLIPAIFLLFGLLLVK
LKPHPDQQSITFTTSHFNPLLTGGGGGGPIPFNLSLLTAKEVSEHVHGGWIQKFQPTTYR
FPDSQQAFKDAVEAAGQTLGPVLLSMSEYLMSSFNESYQSRYGAVVVDKQSENGSLGYTI
LHNSSCQHAAPTFINLINSAILRLATLDENMTIQTRNHPLPLTQSQHLQRHDLDAFTVAV
IVNIAFSFIPASFAVAVVKEREVKAKHQQLISGVSVLSYWASTYIWDFISFLVPSTFAIL
LFVMFGLDQFIARASFFSTVLMFLGYGLAIASSTYCLTFFFSEHSMAQNVVLLVHFFTGL
ILMVISFIMGLIESTAYVNTLLKNFFRLSPGFCFADGLASLALLRQGVKKGSGDNVFDWN
VTGASICYLAAEGVIYFMLTLGLELFLPLKINFATASDLCTSIKNFLGTTSSSSLQPLLK
SSPEDANDFEEDIDVQTERNKVLSGSAGRAIIYLRNLRKVYPGGKQQGSKIAVHSLTFSV
QEGECFGFLGTNGAGKTTTLSMLSGEESPSAGTAFIFGKDIRSSPKAARQHIGYCPQFDA
LLEFVTVREHLYLYARIKGVQEYELERVVSEKLVEFDLLKHADKPSYALSGGNKRKLSVA
IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTRI
GIMVGGKLRCIGSPQHLKNRFGNHLELEVKPTEVSSLDLVTLCQTIQEKFFDFPAHPRNL
LTDLEVCIGGTESTDLTAAATAAEISLSDEMIVTIGRWLGNEERVETLVSGDCGSHGVFR
EQLSDQLLRDGGIPLPVFSEWWLTKEKFSAIDSFIQTSFPGATYQGSNGLNAKYQLPFEE
DLSLADVFGHVESNRNKLGISEYSISQSTLETIFNHFASNS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaacggagagaaaatgaagacggggtcttcaagaagacaattgaaagccatg
ctccgaaagaattggcttctcaagatacgccacccattcatcacctgtgcagagatatta
cttcctactgttgttatgttcctcctcatggccgtgaggatgagagttgacacaaagcta
catccaccacaaccatatattcggaaggacatgctagttgaagtcggaaaagatggcaag
tctgtgcctttcaatcaaattttagaattgttgtataaaaatgatgaatatttggcattt
gcacccgacacaagtgagaccaggatgatgattaatatattgtccatcaagtttcctctg
ctcaagttgacatcaagaatttacaaagacgaggaagagcttgagacatacatacgctca
gacctgtatggtgccgatgatcaagtgaagaacaccacgaacccgaaaattaaaggagct
attgtgtttcatgatcaagggcctaacgtgtttgattatagcatacgcttgaaccataca
tgggctttttctggatttcccgatgttaaatccatcatggatgtcaatggtccatatgtc
aatgacttggaattaggggtgaacacaataccaattctgcagtacagcttcagtggattc
ttaactcttcaacaagtcctggactccttcataatctacgtcgaacaacaacgattggca
aacatagacaccaacaatttagtattaccttcggagtcacctttgtcacacatgctactc
ataccctggacgcagtttagcccttcaaatataagactcgtcccttttccaactcgtgca
tacactgatgacgagttccagtcgatcgtcaagaaagtcatgggagttctgtacttgctg
ggatttctgtatccaatttctcaactgattagttattccgtttttgaaaaggagcagaag
atcaaggaaggactctacatgatgggtttaaaagatgagatgtttcatctctcatggttt
ctaacttacgcactgcagtttggagtctcttctggtgtcatcactctttgcacaatggga
acccttttcaagtacagcgacaagacactggtgtttgcttacttcttctcttttggattg
agctcaataacactatcgtttctgatctccaccttcttcacacgggcaaaaaccgcaata
gcagttgggacactttcttttcttggagctttcttcccttattatactgttaacgatgag
gctgtttctatgatattaaaggttatggcatctttcctttcacccaccgcttttgcttta
gggtcaatcaactttgcggattatgaacgtgctcaggttggcctacggtggagcaacatc
tggcgggattcttcaggggtttgcttcctggtctgccttgtgatgatgttggttgacact
ttcttatatggcgcagttggtctgtgtttagataaggtccttcatagggaaaataagtta
ctctatcgatggcgttctgtgttacgtaagcaattttggaggaagaaaaatgatagcaag
caattttcttccggttctctgatcaaactggttggcagtgactccgagattaacgatcgt
caatttcaaagagatggatatgaaacagctgtagaagaaataagtttagaattaaagcaa
caagagtctgatggcagatgtattcatattagaggtctgcacaaggtgtatgatactaag
aagtcaagttgctgtgctgtcaattctttacaattggtgctgtatgaaaatcaaattctc
gcccttttaggacataatggagctggtaaaagcacaacaatgtccatgcttgttggtctt
gttcatcctacatctggagatgcattagtttttggaaggaacatcttgacagacatggat
gaaatacgcaaaagtttgggtgtttgcccacaatatgacattctttttccagagttgacg
gtgaaggagcacttagaaatattttctcatctaaaaggtgtgaatgaagattgcttggaa
aatgttgtgattgaaatggctgaagaagtaggtttggcagacaaattcaatacggttgtg
ggggctctttctggaggtatgaggaggaaattatctctcggaattgcactaataggagat
agcaaggttgttattcttgatgaacccacaagtggaatggatccttactcaatgcggttg
acatggcagttaattaaaagaattaaaaagggtaggataatattactaactactcactcc
atggatgaagctgatgtgttaggagatcgaattgctatcatggctaatggttctttgaaa
tgctgcggaagttcctttttcttaaagcagaagtatggtgttggttatacgcttactctg
gtcaagactacacctactacctctgcagcagctgatatagtttaccgtcacatcccgtcg
gcaatatgcgtgagcgaagttggtaatgaacttacattcaagcttcctctcgcttcctca
tcatcatttgaaagcatgtttcgagaaatagagtgttacgtgcaaagatcaaatcctact
gttggaactgtaggttacggagacagtaattctcttggcatcgaaagttatggcatctct
gtcacaactttagaagaagtgttcttgagagttgctggtggtgattttgatatcactgag
tgccatgataataagaattatataactcccgattctgatgttcagcaacatggcgaaaat
cacacttcaaatcgaatcattcattcaaaagtttgcaaaagttgtattgaggttattggc
tacatgatggccacaatggggaaagctagttgtttattttgggcaactactctacatatc
ttaaaattcattagtatgcagtgttgttgcttttgcacattgtcaaggtcaacattctgg
aaacactcaaaagcattaattataaagagagcaatgtcagctcgccgcgatcaaaaaaca
attgtttttcagctgttaataccggccatctttttgcttttcggtcttcttttagtcaag
cttaagccgcatcccgaccaacaatcaataaccttcacaacctcacacttcaatccacta
ttaactggtggaggtggaggtgggcctattcctttcaatttatcgttgctaactgcaaaa
gaggtgtcagagcatgtgcatggaggatggattcaaaaatttcaaccgactacatataga
tttcctgattcacagcaggcatttaaagatgctgttgaagctgcagggcaaaccttgggg
ccagttttactttcaatgagtgaatatctaatgtctagctttaatgaatcctatcagtca
aggtatggagcagtagttgttgataaacagagtgagaatggaagtctaggctacaccatc
cttcacaatagttcctgccagcatgctgctccaacctttattaatttgataaattcagca
atactcaggcttgccactcttgacgagaatatgactattcaaactcgtaatcaccctttg
ccactgacacagagtcagcatctgcaacgtcatgatctggatgcctttactgtggccgtc
attgttaatattgccttctccttcatccccgcttcatttgcggtggccgttgtgaaggaa
cgtgaagtgaaagcgaagcaccaacaacttattagtggggtgtctgtactttcatattgg
gcttcaacttatatatgggatttcatcagcttcttagttccgtccacttttgcaattctt
ctttttgtcatgtttggtctagatcaattcattgcgagggcctctttcttctcaactgtc
ctcatgtttctaggatatggattggcaattgcatcatctacgtattgccttacttttttc
ttttctgaacatagcatggcacagaatgttgtcctcttggtgcattttttcactgggctc
attcttatggttatatcattcataatggggctcatagaatcaacagcatatgtgaatact
cttctcaagaatttcttcagattgtcgcctggattttgctttgctgatggattagcttca
ttagctcttttgcgccagggggtgaaaaaaggatcaggtgataacgtctttgactggaat
gtaactggtgcctccatttgttatttggctgctgagggcgtcatttactttatgttgaca
cttggtcttgaactttttcttcctctcaaaataaattttgcaactgcatctgacttgtgt
acgagcataaaaaattttttggggacaacttccagtagctctttacaaccgcttctcaaa
tcaagccccgaagatgctaatgattttgaggaggatatagatgtacaaacagaaagaaac
aaggtgttgtcaggttcagcgggcagggctattatctatctacgtaatcttcggaaggtt
tatccaggagggaagcaacagggttcaaaaattgctgttcattcattgacgttttctgta
caagaaggagaatgttttggttttctaggaactaatggagccgggaaaacgactactctg
tcaatgctctctggagaagaaagtcccagcgctggaactgcctttatttttggtaaagat
atccgatccagcccgaaggctgctcgtcaacatattggttactgtccgcaatttgatgct
ctgcttgagtttgtcaccgtcagggaacacctttatctctatgcaagaataaaaggagtt
caagagtatgaacttgaacgtgtagtgagtgaaaagttggtggaatttgacttgttgaag
catgccgataaaccatcatatgcattaagtggtggaaacaaacggaaattatctgttgca
attgcaatgatcggagatcctcctattgtcattctcgacgagccatctactggaatggat
cctattgccaaaagattcatgtgggaagttatatcacggctatcaaccagacgaggaaag
acagctgtcatcctaactacccacagcatgaatgaagctcaagctctctgtactaggatc
gggataatggttggaggtaagcttagatgcattgggagtcctcaacatttgaaaaataga
tttggaaatcatcttgaactagaggttaaaccgactgaagtaagctccttggacttagtt
actttgtgccaaaccattcaggagaagttctttgactttccggctcatccacgaaattta
cttactgaccttgaagtttgcattgggggtaccgagtctaccgacttaacagcagcagct
acagcagccgagatcagcttatcggatgaaatgattgtgacaatcggaagatggcttggc
aatgaagaaagagtggagactcttgtatctggagattgtggttctcatggagtttttcgt
gaacagttgtctgaccaattgcttcgtgatggtggtattccactgcctgtgttttcagag
tggtggttaacgaaagaaaaattttcagccattgattcatttattcagacttcctttcct
ggtgcaacgtaccaaggtagtaatggattgaacgctaaatatcagctgccgttcgaggaa
gacctctcgcttgctgatgttttcgggcacgtggaaagtaacagaaataaactgggtata
tctgagtacagcatcagccagtctacactcgagacaatattcaaccattttgcttcgaat
tcttga
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