Primulina eburnea: 140828019
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Entry
140828019 CDS
T11060
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140828019
Enzymes [BR:
pebu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140828019
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
140828019
NCBI-ProteinID:
XP_073047122
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Position
1:426557..428869
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AA seq
412 aa
AA seq
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MSNITINSSLSLFFFFFFFLFLISHPVLSTFSHVQDPDLVVQDVHQSINASRRNLGYLSC
ASGNPIDDCWRCDPNWENNRQRLADCAIGFGKNAGGGRDGRIYVVTDPGDDDPVNPRPGT
LRHAVIQNEALWIIFKRDMVIRLNQELVMNSHKTIDGRGASVHISNGPCITIHYASNIII
HGIHIHDCVIAGNGIIRDSPQHAGHWDVSDGDGIVIFAGKNIWIDHCSLSNCNDGLIDVI
HGSTAVTISNNYFTHHDKVMLLGHSDAFGQDKNMQVTIAFNHFGEGLVQRMPRCRLGYFH
VVNNDYTHWEMYAIGGSASPTIYSHGNRFLAPTDRFRKEVTKHEDAPESEWKHWNWISEG
DLMLNGAFFRQSGGGAWAARSRASSLSARPVSLVGSVTRTAGALNCRAGSRC
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatatcaccattaattcctccttatccttattcttcttcttcttcttcttccta
ttcttgatatctcatccagtgctctccacattctctcatgttcaagaccctgatctcgtg
gtacaagatgtgcatcagagcattaatgcgtcaagaagaaacttaggctacctctcttgc
gcttccggcaaccccatcgacgactgctggcggtgcgatcccaactgggagaacaaccgc
cagcgtttagctgactgtgctatcggcttcggcaagaatgcaggtggtggcagagacggc
cgcatctatgtcgtcactgaccccggggacgatgatccagtgaacccacggcctggtacc
ctccgccatgctgtgatccaaaacgaggcgctatggataatcttcaagcgcgacatggtc
atacggctaaatcaagaactcgtaatgaactcccacaaaaccatcgacggccgcggtgcc
agtgtccatatatctaacggcccatgcattactattcactacgcgagtaacataataatc
catgggattcacatacacgactgtgtgatagccgggaatggaattatcagagattccccg
cagcatgcagggcactgggatgtttctgatggagatgggatcgtcattttcgccgggaaa
aatatctggatagaccattgctcgttgtcgaattgtaacgacgggctgatagacgtgatc
cacggttcgaccgcagtcacgatctcaaataattatttcactcatcatgataaggtgatg
ttgttaggacacagtgatgcgtttgggcaggataagaatatgcaggtgaccattgctttt
aatcattttggagaagggctggttcaaaggatgcctaggtgtaggcttgggtattttcat
gtggtgaacaatgactatactcattgggaaatgtatgcaattggtggaagtgcttctcct
accatttatagccacgggaacagatttcttgcacccactgataggtttagaaaagaggtg
acgaagcacgaggatgcaccggaaagcgaatggaaacactggaactggatatcggaaggc
gatctgatgttgaacggtgccttttttcggcagtcgggaggtggagcttgggcagcacgt
tcgagggcatcaagtttaagtgctaggccagtttctctcgtgggttcagtcaccagaact
gctggggcacttaattgcagggctggatctcgttgctag
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