Primulina eburnea: 140829106
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Entry
140829106 CDS
T11060
Name
(RefSeq) uncharacterized protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140829106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pebu03041
]
140829106
Spliceosome [BR:
pebu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140829106
Complex C
U4/U6.U5 tri-SnRNP related factors
140829106
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
140829106
NCBI-ProteinID:
XP_073048200
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All DBs
Position
1:21006242..21009347
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AA seq
388 aa
AA seq
DB search
MANRTDPLAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
HGGNRKPTPFICLVMKMLQIQPDKEIVVEFIKNPEYKYVRVLGAFYLRLTGTDVDVYHYL
EPLYNDYRKLRLKLNDGKFTLTHVDEFIDELLTRDYSCDIALPRIKKRLTLEAIGTLEPR
RSALEDDFEEDEEKDEDDQLANGIDSGDHDKDYYSARSPTRDRDRDRKRDSHRYRDRDYA
RDRDYDREYDRDYGRGRDRDRERDRDRERGRDRHRLRDEDDYGRERDRERDREGRERERR
DRERGRRSYSRSRSRSRDRKDRDGDDRRKKHRSSSPKRRVEGPDDARDEPKKKKEKKAKK
DDGTDHPDPEIAEQNRLRASLGLKPLKL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgaacagatcctctcgccaagagcatacgaggtacgaaccctcaaaacttg
gtagagaagattttgcgttccaagatttatcaaaacacctactggaaggagcaatgcttc
ggcctcacggcggagacgctggtcgacaaggccatggagctcgaccacctcggcggtacg
cacggagggaaccggaagcccacccctttcatctgccttgtcatgaagatgctccagatt
cagcccgacaaggaaatcgtcgttgaatttatcaaaaaccccgaatacaaatatgttcgt
gtgctaggtgccttttatttgcggctcacagggacagatgttgacgtgtatcattacctc
gaaccattgtacaatgattacagaaaactgaggcttaagcttaatgatggaaaattcacg
ttgacacatgttgatgagtttattgatgaactcctgacaagagattactcttgcgatatt
gcattgccacggatcaagaaaagactgacacttgaagcaattggtactctcgaacctcga
agaagtgctcttgaagatgattttgaggaggatgaagaaaaggatgaagacgaccagctt
gcaaatggaatagattctggggatcatgacaaggattactatagcgcacgaagtccaact
agggacagagatcgagataggaaacgagatagccatagatacagggatagagattatgcc
agagatcgggattatgacagagagtatgatagagactatggtaggggacgcgatagagat
agagaaagagacagggatagagaaagaggtagggaccgacatcgcttaagagacgaagat
gattatggtcgtgagagagacagggaaagggatagggaaggcagggagagggagaggcga
gacagggagcgtgggagaagaagctattcaaggagccgaagtagaagcagagatcgcaag
gatcgtgatggcgatgatcgtcgcaagaagcatcgaagttccagtccaaaaaggcgagta
gaggggcctgatgatgctcgggatgaaccaaaaaagaagaaagaaaagaaggcaaagaag
gatgatggaacagaccaccctgatcctgagattgcagaacaaaacaggcttagagcatcc
ctgggactgaagcctctcaagctgtga
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