Primulina eburnea: 140829207
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Entry
140829207 CDS
T11060
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pebu Primulina eburnea
Pathway
pebu03015
mRNA surveillance pathway
pebu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140829207
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140829207
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pebu01009
]
140829207
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140829207
03036 Chromosome and associated proteins [BR:
pebu03036
]
140829207
Protein phosphatases and associated proteins [BR:
pebu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
140829207
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
140829207
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
140829207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
140829207
NCBI-ProteinID:
XP_073048362
LinkDB
All DBs
Position
4:42667535..42674706
Genome browser
AA seq
513 aa
AA seq
DB search
MNGGDGGEAAAATAGPPAPLEWKFSQVFGERSAGEEVQEVDIISAIEFDKTGNHLATGDR
GGRVVLFERTDTKEHGRNRKDLEKMDYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQTANGAVFLLSTNDKTIKFWKVQEKKVKKISELNVDPSKVCSAASSMVSSSPKQ
YLSNGSYPDRSHFSSRNDGLPDGIHSLRLPMVITSSETSLIARCRRVYAHAHDYHINSIS
NNSDCETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAY
SSSKGSIRLIDLRQSALCDSHSKLFEDLEAPGSRSFFTEIIASISDIKFAKDGRHILSRD
YMTLKLWDINMDSSPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSN
LFRVFGCSSGSTEATTLDASKNPMRRQIQTPSRPARSLSSSITRVVRRGSESPGVDSNGN
SFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatggtggagaggcagcggcagctacggcgggtccaccagcgccgctg
gaatggaaattttctcaggtatttggggagaggtcggctggagaagaagtgcaagaagtt
gatataatatctgcgatcgagtttgacaaaactggcaaccaccttgctactggtgaccgt
ggtggaagggtggttttatttgaaaggacagatactaaagagcatgggagaaatcgaaaa
gatttagagaagatggactacccaataagtcgacatccggagtttcgttacaagactgaa
tttcagagccatgaacctgagtttgattatctgaagagtttggaaattgaggagaaaatc
aataagatacgctggtgccagacagctaatggagccgtctttcttttgtccactaatgac
aaaaccataaagttttggaaggttcaagaaaaaaaagttaagaaaatttctgaattgaat
gttgatccttcaaaagtttgtagtgctgcaagttctatggtttcttctagtcctaagcag
tatctttcgaatgggagctatccagatcgatctcacttttcttcgagaaatgatggatta
cctgatggcatccattcactgagattacctatggtaattacaagtagtgagaccagtctt
attgcaagatgtaggagagtttatgctcatgctcatgactaccatatcaattcaatctca
aataacagtgattgtgaaacatttatatcagctgatgatctgagaataaacctctggaac
ttggaaataagcagtcaaagcttcaatattgttgatgtgaagccagcaaatatggaggac
ctaactgaggtgataacatcagcagaattccatcctactcattgtaacatgttagcatat
agtagttcaaaaggatccattcgtcttattgatctgcggcaatcagctttgtgtgattca
cattctaaactatttgaggatctggaggcgcctggctcgaggtcatttttcaccgagata
atcgcttcaatatcagatattaagtttgccaaggatggaagacatatacttagtcgtgat
tacatgaccctaaagctgtgggatatcaatatggattctagtccagtagcaactttccag
gttcatgagtatttaagacccaagctatgcgacttgtatgaaaatgattctattttcgat
aaatttgaatgttgcctcagcggtgacggtcttcgggtggcaactggttcttacagcaac
ctgttccgcgtgtttggttgtagttcgggcagcactgaagcaaccactttagacgctagc
aaaaatccaatgagaaggcagattcagaccccttccagacctgccaggtcccttagcagt
agcattactcgagttgtgagacgaggctcagaaagtcctggagttgactccaatggaaat
tcgttcgatttcactacaaagctgcttcaccttgcatggcacccatcggaaaactcaata
gcgtgtgctgctgcgaatagcctgtacatgtattacgcataa
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