Primulina eburnea: 140829254
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Entry
140829254 CDS
T11060
Name
(RefSeq) nuclear pore complex protein NUP96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pebu Primulina eburnea
Pathway
pebu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140829254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140829254
03036 Chromosome and associated proteins [BR:
pebu03036
]
140829254
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140829254
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
140829254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
CDC13_N
Motif
Other DBs
NCBI-GeneID:
140829254
NCBI-ProteinID:
XP_073048421
LinkDB
All DBs
Position
4:43059487..43065565
Genome browser
AA seq
1047 aa
AA seq
DB search
MSKEIDLRMLKSLHGPQSLHKRRRISVDGVDTFLSCQVSSQVKTPLPTLRHSDYYTKPCL
SELAIQEFTNPGYCSRVIDFTVGKVGYGWVKFVGETDIRCLDLDRIIKFNRCEVIVYEDE
SSKPVVGQGLNKEAEVTLILRLKPLDYFTKSRVRKIVRILKHKTASQGAQFLSFDHLNGE
WKFLVKHFSRFGLSEDEEDIVMNDVSPEAKVPTEMNGYEDSDVDEVTALEGPTLLSHSLP
AHLRLDPVRMKELRMLLFPAEEGEADGFSGMQSSDSPPCVKEPSMSPLHHSSSKTERKMI
PHLVRKTPLALIEYNPGSFSSNFQGSMLMAQQNKGLHLKASTSEGFKLDLKLHKTPLAGS
HSHIIVDAALFMGRSFRVGWGPNGVLVHSGMPVGSASAQCELSSVINIQKVAIDKVIRDE
SNKVKKELIDLCFDSLLNLHKELNHEIKRVDLGTFDLKLQKLVCNRLTLPEICRSYIEII
EKQLEVSSLPPLSRVLFMHQVMVWELVKVLFSSRKMSAEFKSLEADHEEDMVPDGRQNYP
EVDLEALPLMRRAEFSYWIQESVYHRVQEDISSLDESSDLDHIFLLLTGRQLDAAVELAA
SRGDVRLSCLLSQAGGSPATRSDIAHQLDIWRKNGMDFNFFEENRVRLLELLAGNIHGAL
HGVKIDWRRFLGLLMWYQFSPDISLPVVFNTYQKLLNDGNAPFPVPVYVDEGPIEEAGNW
EIGEHFDLAYYLMLLHARQEDDFGALKTMFSAFASTNDPLDYHMIWHHRAVLEAIGIFSS
NDLHVLDMGFVSQLLCAGQCHWAIYVVLHMTHREDYPYLQTTVIREILFQYCQVWSAQDS
QWSFIEDLGVPSSWLHEALAIYFSYNGDLMKALHHFIESSKWQRAHSIFFTSVVHSLFLS
AKHSEIWRLATSMEDHKSEIENWDLGAGIFISFYVLRSSLQEDSNTMIELGTLENKNDDC
RDFIVRINKCLDVSGSKLSLDARVVYSKMAEEVSRLLLSDNDEGSSGEVQLSCFDTVFAA
PMPEDLRSYRLQEAVSLFTSCLSEMAQ
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggaaattgatttaagaatgcttaagtcacttcatggtcctcagtctctgcac
aagagaagaagaatttctgtggacggagtggatacttttctctcatgtcaggtttctagt
caagttaaaactcccttaccaacactgcgacactcagattattatacgaaaccttgctta
agtgagttggctattcaggagtttacaaatccaggttactgtagcagagtcatagacttt
actgttggaaaggttggttatggatgggttaaatttgttggggagaccgatatcagatgt
ttggatctagaccgcatcatcaaattcaatagatgcgaagttattgtctacgaagatgaa
agttccaagcctgtggttggtcagggcctcaacaaggaagctgaagtaactttaatcctg
cggctaaaacctttggattattttaccaagagccgagtaagaaaaattgtgagaatattg
aagcacaagacggcaagtcaaggggcacaatttctctcatttgatcaccttaatggtgaa
tggaaattcttggtaaaacattttagcagatttggtctgagtgaagatgaagaggatatt
gtgatgaacgatgtgtctccggaagctaaagttccaaccgaaatgaatggctatgaggat
tcggatgttgatgaagtgactgccttagagggtccaactctgctttcacattctcttcct
gctcatctcaggcttgacccggttaggatgaaagaactgagaatgttactgtttcctgct
gaggaaggcgaggcagatggttttagtggcatgcagtcaagtgatagtccaccatgtgtt
aaagaaccatcaatgtctccattacaccattcttcttcaaagacagagcgtaagatgatt
ccccatttggttcgcaagactccattagctctaatagagtataaccctgggagttttagt
tctaacttccagggttccatgttgatggctcaacagaataagggtttgcatcttaaggcg
tctacatctgaaggttttaagctggatcttaaacttcacaaaacaccattagctgggagt
cattcccatattatagttgatgcagcattgtttatgggtaggtcatttcgggtaggatgg
ggacccaatggagtccttgttcattctggtatgcctgttggcagtgctagtgctcaatgt
gaattatcctctgtaattaatattcaaaaggttgcaattgacaaagtgattagagatgag
agcaataaagtgaaaaaggaactcattgacctttgctttgactccctcctcaatcttcac
aaggaactgaatcatgaaataaaaagagttgatctgggaacctttgacctaaagcttcaa
aagcttgtctgtaaccgactgacacttccagagatttgtcgaagttacatagagataatc
gagaagcaattagaggtgtcaagtttaccacctctttctcgtgtcctattcatgcaccaa
gtaatggtttgggaattagtaaaagtcctcttttcgtcgaggaaaatgagtgcagaattt
aagtctcttgaagccgatcacgaggaagatatggtaccagatgggaggcaaaattatcct
gaagttgacctggaagcactgccacttatgaggcgggcagagttcagctattggattcaa
gaaagtgtttaccaccgtgtacaagaggatattagttcactcgacgagtccagtgattta
gatcacatattcttgcttcttactggtcggcagctggatgctgccgtggagcttgccgct
tctagaggggatgtaagactatcctgtctgttgagccaggctggtgggtccccagcaact
cgttcagatattgctcatcagcttgatatttggagaaaaaatggaatggattttaatttt
tttgaagagaatagggtaaggcttcttgaattgcttgctggaaacattcatggagcactg
cacggtgtaaaaattgactggagaaggttcctaggactgttaatgtggtatcagttttca
cctgatatttcattacctgttgtttttaatacttaccagaagcttcttaatgatggaaat
gctccatttccagttccagtttatgtcgatgaaggaccaattgaagaagctggcaattgg
gaaataggtgaacattttgaccttgcatattatcttatgcttcttcatgctagacaagaa
gacgattttggtgctctaaagaccatgttcagtgcctttgcctcaacaaatgatccactt
gattatcacatgatttggcatcaccgcgcagttttagaagccatcggaatttttagttca
aatgatctccatgttctcgacatgggatttgtttcccagttactctgtgcagggcaatgc
cactgggccatatacgtggtgcttcatatgacacatcgtgaagattatccttatctgcaa
actactgtcataagggaaattctcttccagtactgtcaagtttggagtgcacaggactca
caatggagcttcattgaagacctaggtgttccttcttcgtggttgcacgaagctttggcc
atatacttcagttacaacggtgacctcatgaaggccttgcatcatttcattgaatcctca
aaatggcagagagctcactccattttttttacttcagtcgttcattcgctctttttgtca
gcaaaacattcggagatatggaggcttgcaacttccatggaggaccacaagtcagaaatt
gaaaactgggaccttggggccggaatttttatttcattttatgtcttgagaagttcattg
caagaagacagcaacaccatgattgaactgggaactcttgaaaacaagaatgatgactgc
agggatttcatcgtccgaataaacaaatgtttggatgtttcgggcagcaaattatcactt
gatgcaagagtagtgtactcaaagatggcagaagaagtctcccgtcttcttctttccgat
aatgacgaaggttcatcaggcgaggttcagttaagctgcttcgacacggtgtttgctgca
ccaatgcctgaagatttacgttcgtaccgtttgcaagaagccgtttcacttttcacatca
tgtctctcggagatggcgcagtaa
DBGET
integrated database retrieval system
