Primulina eburnea: 140829361
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Entry
140829361 CDS
T11060
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pebu Primulina eburnea
Pathway
pebu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140829361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140829361
03009 Ribosome biogenesis [BR:
pebu03009
]
140829361
04131 Membrane trafficking [BR:
pebu04131
]
140829361
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pebu04147
]
140829361
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140829361
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
140829361
Membrane trafficking [BR:
pebu04131
]
SNARE
SNARE associated proteins
Others
140829361
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140829361
Exosome [BR:
pebu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140829361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_18
nSTAND3
Mg_chelatase
AAA_28
AAA_17
ATPase_2
Parvo_NS1
ABC_tran
IstB_IS21
NACHT
NB-ARC
AAA_7
AAA_lid_PRS2_C
TsaE
AAA_24
DUF815
Viral_helicase1
ResIII
Vps4_C
Zeta_toxin
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
140829361
NCBI-ProteinID:
XP_073048632
LinkDB
All DBs
Position
4:43857629..43862998
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AA seq
814 aa
AA seq
DB search
MADHSSSAQTSDTKSNKKDYSTAILERKKSPNRLLVEESINDDNSVVSMHPGRMEMLQLF
RGDTILIRGKKRKDTICVVLADDQCDEIKIQMNKVVRANLRVRLTDMVSVHQCPDVKYGT
RVHILPMDDSVEGRLTGNLFDVYLKPYFMDAYRPVRKGDLFQVRGGMRSVEFKVVEVDPG
EYCVVAPDTAIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKA
IGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE
AEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRSHVIVMGATNRQNS
IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLADDVDLERVAKDSHGYVGADLA
ALCTEAALQCIREKMDIIDLEDESVDAEVLNSMAVSNEHFITALGASNPSALRETVVEVP
NVSWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA
NDCQANFISVKGPELLTMWFGESEANVREIFDKSRQSAPCVLFFDELDSIATQRGNSVGD
AGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDENS
RLQIFKACLRKSPVSRDIDLSALARHTHGFSGADITEICQRACKYAIRENIEKDIERETK
KHENPEAMEEDDADDIVSEIRAAHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGLGSE
FRFADRSETAGGAGGLDPFSAATTTAGNDEDLYN
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcatagttcttctgctcaaacctccgacacgaaaagtaacaaaaaagactat
tctactgcaatattggaacggaaaaagtctcctaatcgccttcttgtagaggagtccatt
aacgatgacaactctgtggtctcaatgcatccgggtagaatggaaatgcttcaactcttt
cgaggagacactatattaataagggggaagaaacgaaaggacaccatttgcgttgttctt
gcggacgaccaatgtgatgagataaaaatacaaatgaacaaagtcgtccgagcaaacttg
agggtacgccttactgatatggtatccgtacaccaatgtccagatgtcaagtatggaacc
cgtgttcatatccttcccatggatgactcggttgagggtcgtctcacaggaaacttgttt
gatgtgtacttaaaaccctacttcatggatgcatatcgtcccgtgaggaaaggtgacctc
tttcaggtcagaggcggcatgcgaagtgttgaattcaaggtggttgaggtagatcctggt
gagtactgtgttgttgcgcctgatactgcaatcttctgcgagggtgaaccgatcaagcga
gaagatgaggagagattgaatgaagttggttatgatgatgtgggtggtgtgagaaagcaa
atggctcaaatccgtgagctagtcgagcttcctttgagacatccacagctcttcaaggcg
attggtgtgaagccacctaaaggtattttactctatggacctcctggatcaggaaaaact
ttaattgcaagagcagtagcgaatgagacgggtgcatttttcttcttaattaatgggcca
gaaataatgtcgaaattggccggagaaagtgaaagtaacttgaggaaagcatttgaggaa
gcggagaagaatgcaccttccatcatctttatcgacgagctagattctattgctccaaag
agagagaaaacacatggtgaagtagaaaggcgtatcgtatcccagcttcttacattgatg
gatggcctcaagactcggtctcatgtcattgtcatgggagctacaaatagacaaaatagt
attgatcctgctctaaggagatttgggagattcgatcgggaaattgacatcggtgtgcca
gatgaagttgggaggttagaagtcctccgaattcatacaaaaaatatgaagcttgctgat
gatgtcgatcttgaaagagtggcgaaagatagccacggttatgttggtgctgatcttgct
gccctttgcaccgaagctgctcttcagtgtatccgagagaaaatggacataattgatttg
gaggatgagtcagttgatgctgaagttttgaattcaatggctgtgagcaatgaacacttt
ataacagcattgggtgcctcgaatccatcagctttgcgtgaaacagttgttgaggttcct
aatgtatcgtgggaagatatcggtgggttggataacgtcaaacgagagctccaagagact
gtccagtatcctgtggaacatcccgaaaaatttgagaaatttggcatgtcaccctctaaa
ggggttctcttctacggacctcccggatgtggaaaaactctgctagcaaaagccattgct
aacgactgccaggccaattttataagcgtaaaaggacccgagttgctgactatgtggttc
ggagaaagtgaggcaaatgttcgagagatatttgacaagtctagacaatctgctccatgt
gtgcttttcttcgacgaacttgactcaattgctacgcagcgcggaaattcggttggagat
gccggcggtgcagctgatagagttcttaaccagctgctgacggaaatggatggaatgaca
gcaaaaaagacggtttttatcataggggcgactaataggccggatatcattgacccggca
ttgctcaggcccggacgcctggaccagttgatctatatcccccttcccgatgaaaattct
cgtcttcaaatcttcaaggcatgcttgcggaagtccccagtgtccagggacattgattta
tcagctcttgcgagacacacacacgggttcagtggtgcagatattacggaaatatgtcaa
cgtgcttgcaagtatgctattcgagaaaatattgaaaaggatatagagagagaaacgaag
aagcacgaaaaccctgaagcaatggaagaagatgacgcagatgatattgtttctgagata
agagcggcacactttgaagagtcaatgaagtacgcacgcaggagcgtgagtgatgcagac
atcagaaagtatcagctcttcgctcagacattgcagcagtctcgtgggttagggtctgag
tttcggttcgcagatcgttctgagactgctggtggtgccgggggtttggaccctttctcg
gcagccacgacaactgcagggaatgacgaggatttgtacaactga
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