Primulina eburnea: 140829981
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Entry
140829981 CDS
T11060
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Module
pebu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140829981
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140829981
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140829981
NCBI-ProteinID:
XP_073049364
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Position
4:complement(44154408..44156524)
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AA seq
396 aa
AA seq
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MYLITNSIADAIFLALFLILCHKSFATPTMLNVMDLGAKPDGKTDSTAAFSTAWSSACGD
INPSTIYVPKGRFLLKNLHFSGPCSNKTITIQVDGTLVAPLDYNVIGNVGNWLFFEGVDG
VSIRGGALDGQGAGLWACKMHGSNCPSGATSLGISNSKNVEIIGLSSLNSQMFHIVINGC
QNVKLQGVNISASGNSPNTDGVHVQLSTDVAILNSKISTGDDCVSIGPGAMNLLIENVDC
GPGHGISIGSLGKDFDEAGVHNVTVRTVRFKDAQNGLRIKTWGRPSKGFVNNVVFQHAIM
NNVQNPIVIDQNYCPGNKNCPGQVSGVKISDVTYQDIHGTSATEVAVKFDCSKTKPCDQI
KLENVTLSYQNHAPKALCSNAAGTTTGRVEPTSCLV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttattacgaactctattgccgacgctatttttcttgcacttttcttgatttta
tgccacaaatcattcgccactccaaccatgttaaatgtcatggatttaggtgcaaagcca
gatggaaagacagactccactgccgcattttcaacggcatggtcctcggcttgcggcgac
ataaatccctccaccatttatgtgccaaaagggaggttcttgctcaagaacttacacttt
agtggtccttgtagcaataagacaatcaccattcaagtcgacggcacccttgtcgccccc
ctcgactacaacgtcattgggaacgtcggaaactggctatttttcgagggtgtcgatggc
gtctctattcgaggtggtgccctcgatggccaaggtgccggcttgtgggcttgtaagatg
catggcagcaactgccctagtggtgcgacgtctctgggaatatcaaattcaaaaaacgta
gaaattattgggctgagttccctaaatagccaaatgtttcatatcgtgatcaatggatgt
caaaacgtgaagttgcagggagtcaacatttcggcttcgggaaacagccctaacaccgat
ggggttcacgtacaattatccaccgatgtcgccattttgaactctaaaatcagtacggga
gacgattgcgtctcgatcgggcctggtgccatgaatttgttgatcgaaaatgtcgattgc
ggccccggacacggcatcagcattggaagcttaggcaaggattttgatgaagctggagtg
cataatgtgacagttagaacggttagatttaaagatgcacaaaatgggctgaggattaag
acatggggaagaccaagcaaagggtttgttaataatgttgtgtttcagcatgcaataatg
aacaatgtgcaaaaccctatcgtgatagaccaaaattattgccccggcaacaaaaattgt
cctggacaggtgtcgggtgtgaaaatcagtgatgttacttatcaggatattcatgggaca
tcagcaactgaagtagctgtgaaatttgattgcagcaagactaaaccctgcgaccaaatc
aaattggaaaacgttaccctaagttaccaaaatcatgcgccaaaggctttatgctctaat
gcggcagggacgaccacggggcgagtcgagccgacaagttgtttggtctaa
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