Primulina eburnea: 140830883
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Entry
140830883 CDS
T11060
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pebu Primulina eburnea
Pathway
pebu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140830883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pebu04131
]
140830883
Membrane trafficking [BR:
pebu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140830883
Hops complex
140830883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TPR_30
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
140830883
NCBI-ProteinID:
XP_073050524
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Position
4:10769297..10783680
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AA seq
841 aa
AA seq
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MVGVALAAEWQLLYNRYYRKPELYQMQWRHVDLTRNKIACAPFGGPIAAIRDDTKIVQLY
AESAQRKLRIYTSSGILISEAIWKNPGGRLIGMSWTDDLTLICITQNGTVYSYNIHAELL
STSSLGKECFDNSVVDCVFWGNGVVCINEAFEIFAVPEFKTPTTVVKMADCGLEEMPLCM
AVIEPQYRNSGDVEVLLGVGDHVLSVEEDGVQELGAGVGPLQKMVVSRKGEFVASFTHDG
RLLVMSSDFSNVIIEYACESALPPDQLAWCGMDSVLLCWDDMLLMVGPYGDPVRYIYDEP
IILIPECDGVRILSNTSMEFLHRVPDSTVSIFQIGSTLPSALLYDALDHFDRRSAKADEN
LRLIRSSLPEAVEACVDAAGYEFDISQQRTLLRAASYGQAFCSHFQHDRIQETSKMLRVL
NAVRHVEIGIPLSIQQYKLLTPNILINRLINAHKHLLALRISAYLGMNQEVVVMHWACTK
ITASLAISDASLLQMLLNKLKICKGISYAAVAAHADKSGRRKLAAMLVEDEPHSSKQIPL
LLSIGEEDNALMKATESGDTDLVYLVLFHMWQKKLPLEFFGTIQARPLARDLFVTYARFY
KHEFLKDFFLSTGQLQDVAFLLWKESWELVKNPMASKGSPLHGPRIKLIEKAQNLFAETK
EHTFESKAAEEHAKLLRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKTEFK
VSEKRWYWLKVFALATIRDWEALEKFSKEKRPPIGYRPFVEACIDAGEKAEALKYIPKLA
DPREKAEAYARIGMAKEAADAASQTKDSELLGRLKLTFSQNTAASSIFDTLRDRLSFQSI
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcgtcgcgttggcggcggagtggcagcttctctacaaccggtactatcgcaag
ccggagctctaccagatgcaatggaggcatgttgacctcacgcgcaataaaatcgcctgt
gctcctttcggcggcccgatcgcggccatccgagacgacaccaagatcgtgcagctctac
gcagagtccgcccaacgaaagctccgcatctatacctcttcgggcattctcatctcggag
gccatctggaaaaacccgggcggtcgtcttatcggaatgtcctggaccgatgacctaacc
ctgatttgcatcacgcaaaacggcaccgtttactcatacaacatccacgcggagttactc
agtacttcctcattaggaaaggagtgtttcgacaacagcgtcgttgattgcgtgttttgg
ggaaacggcgtggtgtgcattaatgaggcattcgagatttttgcagtgccggagtttaag
actccaactactgtggttaaaatggcagattgtggtttggaggagatgccgctttgcatg
gctgtaatcgagccgcagtatagaaattcaggtgatgtggaggtgttgttgggagttggg
gatcacgtgctgtccgtggaagaggatggagtgcaggaattgggagcaggagtggggcca
ttgcagaagatggtggtctccagaaaaggggagttcgttgcatcgttcacgcatgatgga
aggcttctggtcatgtcctctgatttttctaatgttattattgaatacgcttgtgagtca
gcgcttcctcctgaccaactagcttggtgcggaatggacagtgtcttactttgctgggat
gacatgttattgatggtgggcccttatggcgatccagtccgctacatctacgatgagcca
ataattttgatcccagaatgtgatggtgtgcgaatactttctaatactagtatggagttt
ctgcatcgagtcccagactctacggtgtctatttttcagattgggagcaccttaccctct
gctttgttatatgatgctctggatcattttgaccggagaagtgccaaggctgatgaaaat
ttaagattgatccgctcttctctgccagaagctgttgaggcttgtgtcgatgctgctggt
tatgaatttgatatttctcaacagcgaacgctactgagagctgcaagctatgggcaagct
ttttgcagccattttcaacatgaccgaattcaagagactagtaaaatgctacgagtatta
aatgctgtgcgccatgttgagatcggtattcctcttagtattcagcaatacaagctgctt
acaccaaacattctgattaaccgtctgattaatgctcataaacatcttctagctttgcgt
atatcagcataccttggcatgaatcaagaagtcgtagtgatgcattgggcctgtacaaag
ataacagcatctttagcgatatctgatgcaagtctcctacaaatgttacttaacaagctc
aaaatatgcaaaggcatatcatatgcagctgttgctgcacacgctgacaaaagtggtcgt
agaaagttagctgctatgctagttgaagatgagcctcattcatccaaacagattcctctg
ttgctcagcattggagaagaagataatgcactcatgaaggctactgaaagtggtgatact
gatcttgtttatcttgtcctgtttcatatgtggcagaagaaactacccctagagtttttt
ggaacaatacaagccagaccacttgcacgtgatttgttcgtgacttatgcacggttttac
aagcacgaatttttgaaggacttctttctttccaccgggcaactccaggatgtagctttt
ctattgtggaaagagtcttgggaactagtaaagaatccaatggcaagcaagggatcccct
cttcatggtccacgtattaaattaattgaaaaagcccaaaatctttttgcagaaacaaaa
gaacatacatttgagtctaaggcagcagaggaacatgcaaaattgttgaggattcaacat
gaattagaggtgactactaaacaggcaatttttgtggattcaagtatcagtgacacgatt
cgcacttgtattgtcctgggaaatcatcgggctgccatgaaagttaaaactgaatttaag
gtttcagagaagaggtggtattggcttaaagtttttgctttggcaacaatccgtgattgg
gaggcacttgaaaaattttcaaaagagaaaaggccacctattggttaccggccgtttgtg
gaggcatgtattgatgcaggtgagaaagctgaagctcttaaatatattccaaaacttgct
gatcccagagagaaagccgaggcttatgctagaattgggatggccaaggaagctgcagat
gccgcatcccagacaaaggatagcgaactgctgggccgtttgaaacttactttttctcaa
aataccgccgcttcctcaatttttgatactctgagagaccggttatccttccaaagcatc
tcctaa
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