Primulina eburnea: 140830957
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Entry
140830957 CDS
T11060
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pebu Primulina eburnea
Pathway
pebu03022
Basal transcription factors
pebu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140830957
09124 Replication and repair
03420 Nucleotide excision repair
140830957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140830957
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140830957
Transcription machinery [BR:
pebu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
140830957
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
140830957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_GTF2H2
IBR
VWA
Cache_BaeS_N
Motif
Other DBs
NCBI-GeneID:
140830957
NCBI-ProteinID:
XP_073050655
LinkDB
All DBs
Position
4:complement(31661108..31664704)
Genome browser
AA seq
422 aa
AA seq
DB search
MSHNETNGEDIRFNREEDDDEEEEGDGRGLDAWERAYADERSWEFLQEDESGLLRPIDNK
TLQHAQYRRRLRTATSVRIQKGLIRYLYIVLDLSRAASEMDYKPSRMVVVARQVEAFIRE
FFDQNPLSQIGLVTLKDGVAHSLTDLGGSPESHIKVLMGKLECSGDASLQNGLDLVHSLL
NQIPTYGHREVLILYSALSTCDPGDVNEAIEKCKSSKIRCSVIGLSAELYVCKCLCQKTG
GSYYVALDEPHLKELILEHAPPPPAIAEFAIPNLIKMGFPQRAAEGVISICSCHKEAKSG
GGYICPRCRARICELPSECRICGLTLVSSPHLARSYHHLFPITPFNDLSPSVLNDPRKLP
KNCFGCQQSLLNPGNLPAPCVSCPKCKQHFCFECDIYIHESLHNCPGCEGFRHSKSMDAM
QG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacaatgaaacaaatggtgaagatatacgatttaacagagaagaggacgatgat
gaagaagaagaaggagatggtagggggcttgatgcatgggaaagggcatatgcagatgag
agatcttgggagtttcttcaagaggatgaatctgggcttctccgccctattgacaacaaa
acccttcaacatgctcaatatcgtcgacgtcttcgcaccgcgacatctgtccgtattcag
aaaggcctgattcgttatttgtacattgttcttgatctatctcgggccgcgtcagagatg
gattataaaccaagtcgaatggttgttgttgctcgacaagtggaggctttcatcagggag
ttcttcgatcaaaatcctttaagtcaaattggtttagtgacattaaaagatggagttgca
catagtcttacagatcttggcggaagtcctgagtcccatatcaaagtgttgatgggtaag
ttggaatgctctggtgacgcgtccctccaaaatggtcttgatcttgtacacagcctcttg
aatcaaatcccaacatacggtcaccgtgaagttcttattttgtattctgctcttagcact
tgtgatcctggtgatgtaaatgaagccatcgagaagtgcaagagttctaaaatcaggtgc
tcagttattggtctctctgcggagctttatgtgtgcaaatgtctttgccaaaaaactggt
ggatcatattacgttgccctagatgagcctcacttaaaagagttaatccttgagcatgca
ccgccgcccccagctatagcggaatttgcgattccaaatctgatcaagatgggttttcca
caaagagcggcagagggtgtgatctcaatttgttcttgtcataaggaggctaagagtggt
gggggatatatttgcccgagatgcagagcacgcatctgtgaacttccaagtgaatgtcga
atatgtggactgacacttgtttcatcaccccatttggcaagatcttaccatcacctcttt
cctattaccccatttaatgatttatcaccttcagtgttaaatgatccacgcaaattgccg
aaaaattgttttggttgccagcaatctcttctgaatccaggaaacttgccagctccttgt
gtttcttgtccaaaatgtaaacaacatttttgcttcgaatgtgatatttatattcacgag
agcctgcacaattgtccgggttgtgagggcttccggcattccaagtccatggatgctatg
caaggatga
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