Primulina eburnea: 140831889
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Entry
140831889 CDS
T11060
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140831889
Enzymes [BR:
pebu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140831889
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140831889
NCBI-ProteinID:
XP_073051703
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Position
5:complement(3948407..3949991)
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AA seq
296 aa
AA seq
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STQFYVFLDDGPGSLRDACRKKEPLWIIFEVSGTIELSSYLNVSSYKTIDGRGQRIKLTG
KGLRLKECEHVIICNLLFEGGRGHDIDGIQIKPNSKHIWIDRCSLKDYDDGLIDITREST
DITISRCHFANHDKTMLIGADPSNINDRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNY
TRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYYTEKAADKVQECTGCVKSEGDLFVP
GTQPGLMPLPSETSVFHPSEFYETWTVEAPTADLKHFLQHSSGWRNTLRPADLASS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
tcaacccaattctatgtatttctagatgacggacctggttcacttcgcgacgcatgtcgt
aaaaaagagcctttgtggatcatcttcgaagtttcaggcaccatcgagctctcatcttat
ttaaatgtgtcatcttataagaccattgatgggcgtggtcaaagaattaaactcactgga
aaaggtttgaggttaaaggaatgtgaacatgtgattatctgcaaccttttattcgaagga
ggaaggggacatgatattgatggaattcaaattaaaccaaattcaaagcatatttggatt
gatcgttgcagcctcaaggattacgacgacgggctgatagatattactcgagagagcacc
gatattaccatttctcgatgtcatttcgcgaatcatgataagaccatgcttattggtgcg
gatccttctaatataaatgatagatgtattcgggtcaccatccaccattgtttctttgat
gggactcgacagcggcatcctcgtgtcagatttgggaaagtacatctgtacaataactat
actagaaattggggaatatacgctgtttgtgccagtgttgaatcacagatatactctcag
tgcaacatatatgaagcggggcagaagaaggtggcttttaaatattacacagaaaaggca
gctgacaaggtacaggaatgtacaggctgcgtaaaatcggaaggtgatttatttgttccc
ggtacacaaccaggcttgatgccactcccaagcgagacgagcgtgttccatccaagcgaa
ttttacgagacatggactgtagaagctcctactgctgatctgaaacactttctccaacac
tcttcaggatggcggaacaccctgcgacctgccgacttggcttcttcttaa
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