Primulina eburnea: 140832168
Help
Entry
140832168 CDS
T11060
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pebu Primulina eburnea
Pathway
pebu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140832168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140832168
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140832168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_NXF1-5
LRR_4
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
140832168
NCBI-ProteinID:
XP_073052126
LinkDB
All DBs
Position
1:55747315..55750952
Genome browser
AA seq
581 aa
AA seq
DB search
MGYSFPEEVLEHVFSFLSSDKDRNAVSLVCKSWYEIERWCRRRIFVGNCYAVAPEIVIRR
FPEVRALEMKGKPHFADFNLVPEGWGAYMDPWISAMSVAYPFLEEIKLKRMVVTDDSLEL
ISKSFKNFKVLVLSSCEGFTTDGLASIAANCRNLRELDLRESEVEDLNGHWLSHFPDNFT
SLVSLNMSCLHSEVNLSTLERLVARSPNLKTLRLNRAVPLEKLPNLLRRAPQLVDLGTGV
YSAEIRSDTFSNLTESFSTCKQLEGLSGLWDVVQAYLPAMYSVCSGITSLNLSYATIQSS
DLVKLVGQCRNLQRLWVLDYIEDSGLEAVAESCKDLQELRVFPSDPFGGEPNVSLTERGL
VSVSEGCPKLQSVLYFCRQMSNTALIAIARNRPKMIRFRLCIIEPRARDYITLEPLDTGF
GAIVEKCKDLRRLSLSGLLTDRVFDYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPMLNVEVIDESGPP
DSRPDSWPVEKLYIYRTVAGRRLDMPDYIWKMDEDKELEYS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggggtactcgttcccggaggaggttctggaacatgttttctccttcctcagctccgac
aaggatcggaacgctgtttccttggtttgcaagtcttggtacgagatagagcggtggtgc
cgccgccgtatcttcgtggggaactgctacgccgtcgcgccggagatcgtgatccggagg
tttcctgaggtgagggcgttggagatgaaggggaagccgcatttcgccgacttcaacctg
gtgccggagggttggggggcgtatatggacccgtggatctcggcgatgtcagtggcgtac
ccttttctcgaggagatcaagctcaagcgcatggtggtgacggacgatagcttggagctg
atctcgaagtcgtttaagaatttcaaagtgttggtgctctcgtcttgcgagggttttaca
actgacggtctcgcttcgattgctgctaattgcaggaatcttcgagaacttgacttgagg
gaaagtgaagtggaggatttaaatgggcattggcttagtcatttccctgacaactttacc
tcactggtgtcgctgaacatgtcttgcttacactctgaggtgaatttgtccaccttggaa
cgactggttgctcgatctcctaatctgaagacgcttcggctcaatcgtgctgttcctctc
gagaagctccctaatctacttcgccgtgcacctcagttggttgacttgggtacaggtgtc
tattccgctgaaatccggtccgacacattctctaacttgacagaatcattttccacttgt
aagcagcttgaaggcttgtcaggtctttgggatgtggttcaagcttatcttccagccatg
tattccgtctgctccggtatcacatcactgaatttaagttatgcaaccattcaaagttcc
gatctagtcaaacttgttggccagtgtcgaaatttacagcgtctatgggttctggattac
attgaagacagtggtcttgaagctgttgcagagtcttgcaaggatctgcaggaacttcgg
gtgtttccttcagatccttttggaggagaaccaaatgtatctctcactgaaagggggctt
gtttctgtctcagagggctgccccaaacttcaatctgttctttacttctgccgtcagatg
tcaaatactgctttgattgctatagcaaggaatcggcccaagatgatccgcttccgactg
tgtatcatcgagcctcgggcccgtgattacataaccctcgaaccacttgatactggtttt
ggagccatcgtggagaagtgcaaggatctacggcgcctttccttgtctggtctcctcact
gatcgagtattcgactatattgggacacatgctaagaaactggagatgctttccatagct
tttgcaggggatagtgacttgggcctgcatcatgtattgtccgggtgtgaaagtctccgg
aaactggagataagagactgtccatttggggacaaggctcttttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctcagttagttatggagcgtgtaag
ctgcttggtcaaaagatgcctatgctcaatgtcgaagttatcgatgaaagtgggcctccg
gattcgagacctgatagctggcctgttgagaaactctacatttatcggacagttgcagga
cgaagacttgatatgcccgattacatctggaaaatggatgaagacaaggaactggaatat
tcttaa
DBGET
integrated database retrieval system
