Primulina eburnea: 140832775
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Entry
140832775 CDS
T11060
Name
(RefSeq) protein ALTERED SEED GERMINATION 2 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
pebu
Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140832775
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
140832775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
TRM82_WD
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR41
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
140832775
NCBI-ProteinID:
XP_073053049
LinkDB
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Position
5:complement(6773321..6792978)
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AA seq
760 aa
AA seq
DB search
MESSICFNDGSITNFIDSRTIGVHHDFNKDVQTHSSLLRRLSLERELEGHRGCVNALAWN
SEGSLLVSGSDDARLNIWSYSSRKLLLSIDTGHSANIFCTKFVPETSDELVVSGAGDAEV
RLFNLSRLKGRERDGGGINPLALFQCHTRRVKKLAVEAGNPNVVWSASEDGTLRQHDFRE
CASCPAAGSSHQECRNVLLDLRCGAKKSLADPPKHVLMLKSCDISYARPHLLLVGGSDSF
VRLYDRRMLPPMSSSQKKMTSPPCVNYFCPMHLSDLGNFSLHLTHVAFSPNGEEVLLSYS
GEHVYLMDANLAASGSTMRYTSEDVTKLISFYPPHGGTDLHSSAWGMSLNGFPVRSKISA
KIKKCRKLIQIAQRTLKGELDFYYGIEACNEVLAFLGLEIEPTIVLECLCIRASLLLKRR
WKNDVHMAIRDCYQARKIDPTSVMALICMAEGLTMLNKHKQALDFAIAAQALAPSDFEVM
EKVENIKKSIAAVEIEADMHGDGGSKSEYQSGRVLSLSDIIYHSEADSALLDGPEREDSD
YEELELDFETSISGEGGDSVDSAILDRNLNLRIRRRDATALENGRPNDTCGSLQLSSEND
KVPYQPETITDMKQRYIGHCNIGTDIKQASFIGRRGEYVASGSDDGRWFIWEKKSGRLLK
MLRGDEAVVNCIQCHPYDCVIATSGIDSTIKIWTPNSPVPSIVAGGAAGPETSNVLDAME
ENQRRLCRTREAILPFEILERFRMHEFAEGRFHPFECTQS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagtcatcaatctgctttaacgacggcagcatcacaaatttcatcgacagtcgaaca
atcggggttcaccatgattttaataaagatgtgcaaacacattcctcactcttgcgaagg
ctgtcactagaaagagaactggaggggcaccgtggttgtgtaaatgctttggcatggaat
tcagaaggttcgctgttggtatcaggatctgatgatgcacgacttaatatttggtcttat
tcaagccgaaaacttttgctctccattgacaccggccattctgctaacatattctgtaca
aaatttgttcccgaaacttcagatgaattggttgtttctggggcaggggatgctgaggtg
cgactattcaatttatctcgtttaaagggcagagaacgggatggtggtggaatcaaccca
ttagcactttttcaatgtcacacaaggagggttaaaaaattagctgtggaagccgggaat
cccaatgtggtgtggagtgccagtgaagatgggacactgagacaacatgattttcgtgaa
tgtgcttcatgccctgctgctgggtcctctcaccaagaatgtcgtaacgtccttcttgat
ttgcgctgtggagctaaaaaatcattagcagatccacccaaacatgtgcttatgttgaag
tcttgtgatatcagttatgctagacctcatttacttctcgttggcggcagtgattcattt
gtgcgtttgtatgatagacgaatgctaccgccaatgtcttctagtcaaaaaaagatgaca
tcgccaccatgcgtcaattacttctgcccgatgcatctttctgaccttggtaattttagc
ttgcatcttactcatgtcgcttttagtcctaatggtgaggaggttcttcttagttacagt
ggtgagcatgtgtacttgatggatgcaaatcttgcagcttctgggagtacaatgaggtac
acgtcagaagacgtcacaaagcttatcagcttttatcccccacacggtggaacagattta
cactcctctgcatggggcatgtctctgaacggttttcctgtaagaagcaagatttctgca
aagattaaaaagtgcaggaagttgatccagattgcacagagaactttaaaaggagaattg
gatttttattatggaattgaggcttgtaatgaagttttagcttttcttggtcttgagatt
gagccgactattgtgctcgaatgtttgtgtatccgtgcatccttgttgctcaagcggaga
tggaaaaatgatgtgcacatggctatcagggactgctatcaagcccggaaaatcgatcct
acttcagttatggcattaatttgtatggctgaaggcttgaccatgttaaacaagcacaag
caagctttggactttgctattgcagctcaagctctagctccatcagattttgaagtcatg
gaaaaggtggaaaatataaagaagagcatcgctgcagttgaaattgaagctgacatgcat
ggcgatggagggtcgaagtctgaatatcaatctggaagagtactttctctgagtgatatt
atctaccattcagaagcagacagtgctttactagatggtccagaaagagaagactctgac
tatgaagaactagaattggattttgaaacatcaatatcgggtgaaggaggagatagtgtt
gactctgctattcttgataggaacttgaatttaagaattcgcaggagagatgctacagcc
ttggaaaatggaagacctaacgatacttgtgggtcgctccaattgtcaagtgaaaatgat
aaagttccatatcagcccgagaccataacagatatgaagcagagatatattggtcactgt
aacatcggcaccgacataaaacaagctagttttattggtcgaagaggtgaatatgttgcc
agtggaagtgatgacggaagatggtttatttgggaaaaaaaatctggccgattattaaag
atgctgcgtggagatgaagctgttgtgaactgtatacaatgccatccatatgactgtgtc
atcgcaacaagtggaattgacagcaccataaagatctggactccaaattctcctgtccct
tctattgtagctgggggagcagcaggaccagagacttcaaatgtattagatgccatggaa
gaaaatcaacgcagattgtgtcgcactcgggaagcaattttgcctttcgaaatcctggag
cggttccgcatgcatgagtttgctgaaggaaggtttcatccatttgagtgcacacaaagc
taa
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