Primulina eburnea: 140832854
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Entry
140832854 CDS
T11060
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140832854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140832854
03041 Spliceosome [BR:
pebu03041
]
140832854
03036 Chromosome and associated proteins [BR:
pebu03036
]
140832854
Transcription machinery [BR:
pebu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140832854
Spliceosome [BR:
pebu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140832854
Complex B
140832854
Complex C
U2 SnRNP specific factors
140832854
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
140832854
TFTC complex
140832854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML_2
WDR55
Motif
Other DBs
NCBI-GeneID:
140832854
NCBI-ProteinID:
XP_073053195
LinkDB
All DBs
Position
5:complement(7873547..7879516)
Genome browser
AA seq
1211 aa
AA seq
DB search
MYLYSLTLQQATGIICAINGSFSGGKSQEIVVARGKVLDLLRPDDNGKLQSLLSVEIFGA
IRSLSQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNAFDKIHQETFGKSGCRRIVPGQYS
AIDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSISGVDCGFENPV
FAAIELDYSEADQDPTGQAANEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRREDLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDMFKVTLDHENDRVKELKIKYFDTIPVTSSLCVLKSGFLFAASEFGNHALYQFQAI
GDDPDVEASSATLMETEEGFQPVFFQPRKLKNLLRIDQIESLMPMMDMKVTNLFEEETPQ
IFSLCGRGPRSSLRVLRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGEIIYFEVDMTGQLMEVEKHEMSGDVACLDISPIPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSLQSVSSPPESLLFLEVQASSGGDDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSIIVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRIFTIERLGESFNETAIPLRYTP
RKFLVQPKRKLLVIIESDQGAFTAEEREAAKKESFVSSGVGENGNIEQMENGDDEENNDP
LSDEQYGYPKAEAGKWVSCIRVMDPRSALTTCLLELQDNEAAFSMCSVNFHDKEYGTLLA
VGTAKGLQFWPKRSFEAGYIHVYRFKEDGKVLELLHKTQVDGIPLALCQFQGRLLAGIGP
VLRLYDLGKRRLLRKCENKLFPNTITSIQTYRDRIYVGDMQESFHYCKYRRDENQLYIFA
DDTVPRWLTAAQHIDFDTVAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA
PNKVEEIVQFHIGDVVTCLQKASLIPGGGECIIYGTVMGGLGAFLPFTSRDDVDFFSHLE
MHMRQEHPPLCGRDHIAYRSSYFPVKDVIDGDLCEQFPTLPMDMQRKVADELDRTPGEIL
KKLEEIRNKII
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgtacagcctaactcttcaacaagctacaggcatcatctgtgccatcaatgga
agcttctctggcgggaaatcacaagaaattgtggtggcgcgtgggaaagtactcgacctc
ctgcgacccgacgacaatggtaagctacagtctcttctgtctgttgaaatttttggcgct
attcgctctctatctcaatttcgcctcactggagcgcaaaaagattacattgttgttggc
tctgattctgggcgcatcgtaatccttgaatacaacaaagagaagaacgcatttgataaa
atccatcaggaaacttttgggaaatctgggtgccgtagaattgtccccggtcagtattcg
gccatcgaccctaagggtagagctgtgatgattggtgcttgcgagaagcagaagcttgtt
tatgttttgaatagggatacggtagctagattgactatttcatcgcctctagaggcacat
aagagccacactatttgttattccattagcggggtagattgtgggtttgaaaacccagtc
tttgcagctatagaattggattattctgaggctgaccaggaccccactggtcaagcggcc
aacgaggcgcagaagcatttgactttttatgagttggatttgggtcttaaccatgtttca
aggaaatggtctgaacaggtcgataatggtgctaatatgcttgtcacagtgcctggtggt
ggggatggtccaagtggtgttcttgtgtgtgcagagaattttgtcatatataagaatcaa
gggcatccagatgtcagagcggtgattccgaggcgtgaggacttaccggctgagcgtggg
gttttgatcgtctcagctgctatgcataagcagaaatccatgtttttcttcctcttgcaa
actgagtatggggatatgtttaaagtgacgttggaccacgagaatgacagagtaaaagag
ttgaagataaaatattttgatactattcctgtcacatcatctttgtgtgtcttgaagtca
gggtttctatttgctgcatctgagtttgggaaccatgccttgtatcaatttcaggcgata
ggagatgatccagatgtggaggcatcatcagctacactgatggaaacagaagaaggtttt
cagcctgtgtttttccagcctagaaaactgaagaatctacttaggatagaccaaattgag
agtctgatgccaatgatggatatgaaagtcactaatctattcgaggaagaaactcctcag
atattttcactttgtgggcggggtcctcgttcatcactccgtgttttgagacctggtttg
gctattagtgaaatggcagtatcacagttgcctggtgttccaagtgctgtgtggactgtc
aaaaagaatgtcaatgatgaatttgatgcctatattgttgtctcttttgcaaacgccact
ctcgtgctttccattggtgagactgttgaagaagtaagcgacagtgggtttcttgataca
acaccttctcttgctgtttctttgattggcgacgattctttgatgcaagtgcatcccagt
ggtattaggcatatcagggaagatgggcgtattaatgagtggagaactccaggaaagaga
acaattgttaaggttgggtctaacagacttcaagttgtcattgcattgagtggaggggaa
attatatattttgaagttgacatgactggtcagttgatggaggttgagaagcatgaaatg
tcaggagatgttgcctgtttggatatttctcctatccctgaaggaagacagagatcacgg
tttcttgctgttggatcttatgataacaccattcgcattttgtctttggatcctgacgac
tgtatgcagatactaagtttgcaaagtgtttcatcacctccggaatctctcctatttctt
gaagttcaggcttctagtggaggtgatgatggggctgaccaccctgcaagcctctttttg
aatgctggtctacaaaatggagttttattcaggacagtagtggatatggtgactggacag
ctgtcagatgcccgatctcggttcttaggacttagagcaccaaagctgttttctataatt
gtgagaggacgaagagctatgctttgcttgtcaagtagaccttggctaggttatatacac
caaggacatttccttctcacaccattgtcatatgagactcttgaatatgctgcttcattt
tcatcggatcagtgtgcagaaggtgttgttgctgtcgctggggatgcattaaggattttt
actattgaaagacttggagaatcttttaatgaaacagcaatacccttgaggtatactcct
aggaaatttttagttcaacccaaaaggaagctgttggtaataattgagagcgatcaggga
gcattcactgcagaagagcgcgaagctgcaaaaaaggagtccttcgtgtcttctggagtg
ggggaaaatggaaacatagagcagatggagaatggtgatgatgaggaaaacaatgatcca
ctttctgatgagcagtatggatatccgaaggcggaagctggaaagtgggtttcctgcatt
agagttatggatcctaggtcagctttaacaacctgtctgctagagctccaggataatgaa
gctgcgttcagcatgtgctctgtgaatttccacgataaggaatatggaacacttttggct
gttggaacggcaaaaggtcttcagttttggcccaaaagatccttcgaggctggatatatt
cacgtatataggtttaaagaagatggaaaagtcctcgagcttttgcacaagacacaagtg
gacggtatacctctcgcattatgccaattccaaggaagattgctcgctgggattggtcct
gtacttagattgtatgatttagggaaaaggaggttgcttagaaagtgtgagaataaatta
ttccccaacacaatcacttccatccaaacctatcgcgatcgaatttatgttggggacatg
caagagtcgtttcactactgcaagtacagacgtgatgagaatcaattatatatatttgct
gatgacactgttccaagatggcttactgctgctcagcatatcgacttcgacaccgtggct
ggtgcagacaaatttggaaatatctactttgtccgattgccacaggatgtgtcagatgag
attgaagaagaccccactggtggtaagataaagtgggagcaggggaagttgaatggagca
ccgaataaagtagaggaaatagttcaatttcacattggtgatgtggtcacttgcttgcag
aaagcatctctgattcccggaggtggagagtgcatcatatatgggactgtaatgggtggt
ttgggggcattccttccatttacatcacgtgatgatgttgacttcttctctcatctggag
atgcacatgcggcaggagcacccacctttgtgtggcagagaccatattgcgtacagatca
tcctattttcccgtgaaggatgttatagacggagatttgtgtgaacaattcccaaccttg
cccatggatatgcaacgtaaagttgctgatgagctggatagaactccgggggagatttta
aagaaactggaagaaataagaaataagatcatttaa
DBGET
integrated database retrieval system
