Primulina eburnea: 140833082
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Entry
140833082 CDS
T11060
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pebu Primulina eburnea
Pathway
pebu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140833082
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pebu01002
]
140833082
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140833082
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140833082
Peptidases and inhibitors [BR:
pebu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140833082
Ubiquitin system [BR:
pebu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140833082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
140833082
NCBI-ProteinID:
XP_073053597
LinkDB
All DBs
Position
5:complement(20096172..20101655)
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AA seq
1048 aa
AA seq
DB search
MGKKVNKKARSVQKEKRVSSPSPKILPEQCSINAEAPHIDGVAVKERGVCSHIDRGIDWD
KLSVKLDPSEPFKCEDCRESALDRRANKGKPKHGKKGGINSKSELKAIWICLGCGHFSCG
GIGFPTISNSHAVRHAKQNHHPLAIQFENLQLLWCFPCDKLLTFEKPEDIDERKNVIHEV
AKMLKARPSKGSTINVEDVWFGSGSGTSAMKSEYSVPNKADERVGYSVRGLINLGNTCFF
NSIMQNLLAINQLRDYLFEFDESVGPLSASLRKLFLETSAEAGLKGVINPRSLFGSLCSK
APQFRGYQQHDSHELLRCLLDSLCTEEMSARKQVKSSLADGTTSIAKPTFVDAIFGGQLS
STVCCLECGHSSTIYEPFLDLSLPVPTKKPPSKRSQPATRGKKIKLPLKQGGRIDSKVNR
DEPILPAESVSDQSTFVDSYTLMQPRVQTAELPVDSASSISIDLNAVVLDMGLTHQDLSD
SQEAKNHTEVNNVGEQSISSNVLTWLDYLEPNLVSNDYDGTSETHEVSADQGSADKNVFQ
NDVSIPITFYCRIGSDLESECAVSTMPLDSSCQFNPLDQGIVTHQQDASSQYVEKQNEIS
QSDEKLSTDHSLIKEVIQLNADVGHSLVNDSTVEVCSSGCDTVNPSQVKESEVIFLPYKE
DASSSFELLGEEIEITSEVVSDEHASQEFDGFGDLFNEPEVTLELGTSYPACEATDAMKN
EVGNSSDSDPGEVDNSDVSVSVESCLAFFTRPELLSKDEYAWQCDNCSKVLQQGTRRKLR
KLKTKIVPNGCDDTNANGPLEGCGNNLHEVEIISGMMENDAFDGSDGMLVPHNQEMHDIS
NSMLSNHQESKMNMIACQSENQVSMKPNLCHGMSECSCSNSQILDSCCGKRDADSVGLTE
TDLLPEKCESEVSEGEEVDSKSLKVKRDATKSILISKAPSVLTIHLKRFSQDARGRLSKL
NGHVNFRETIDFNPYMKPRCTNVGKRTYRLLGAVEHSGNMRSGHYVAYMRGGQGDSTIWY
YASDTHVRQVSLEEVLSCEAYILFYEGT
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggtcaacaagaaagcaagaagtgttcaaaaagagaagcgtgtctcctca
ccttctcctaaaatacttcccgaacaatgcagcatcaatgctgaagctcctcacattgac
ggagttgcagttaaagaaagaggagtatgttctcatatagatagagggattgattgggac
aaactttctgtcaaactagacccatcagaaccttttaaatgtgaagattgtcgagaaagt
gccttggatagacgagcaaataaaggaaaacctaaacatgggaagaaaggaggaatcaat
tcaaaatcagagttgaaagcaatttggatttgcttgggatgtgggcatttctcttgtgga
ggcattggattccccaccatatctaacagccacgcagttcggcatgcaaaacagaatcac
catccattggccatacagtttgaaaatcttcaactgttgtggtgtttcccttgcgataaa
ttactcacttttgaaaagccggaagacatagatgaacggaagaatgtcatacatgaggtt
gctaaaatgctgaaagcacgaccaagtaaaggatccactattaatgtggaggatgtttgg
tttggaagtgggagtggaactagtgcaatgaaatcggaatactctgtacccaacaaggca
gatgaaagagttggctattcagtaagaggtttaattaatttaggaaatacctgtttcttt
aattcgataatgcagaatttattggcaataaatcagttgcgggattacctttttgaattt
gatgaatctgttggtccacttagtgcttctctgagaaagcttttcttggaaaccagtgct
gaagctggtttaaaaggtgtgataaatcccagatctttatttggtagtctttgtagcaag
gctcctcagtttaggggatatcagcaacatgatagccatgagttactaagatgtttgctt
gatagtttgtgtaccgaagagatgagtgctagaaagcaagtcaaatcttcgttggccgat
gggacaacttctatagcaaagcctacatttgtagatgccatctttggtggacagctttca
agcactgtttgctgtttggaatgtgggcactcttcaacaatttacgagccctttttggac
ctctcgttgccagttcctaccaagaaacctccatccaaacggtctcaacctgccactcgg
ggcaagaaaatcaaactgcctcttaagcaaggcgggaggattgactccaaagttaacaga
gatgaacctattcttccagcagaaagtgtttctgatcaatcaacttttgtcgactcttac
actttaatgcagcctagagtacaaactgctgagcttccagttgattctgcatcatcaata
tccattgatttaaacgctgttgttcttgatatgggtttaacacatcaagatctttcagat
agtcaggaagcaaaaaaccatacagaagttaataatgttggagagcagtcaatctcatcg
aatgttttaacatggttggattaccttgagccaaatctggtgtcaaatgactatgatggt
acctcagaaactcatgaagtgtctgcagaccagggttctgcagataaaaatgtttttcag
aatgatgtctcaatacccattactttctactgtaggattggtagtgatttagaatctgaa
tgtgctgtttcgacaatgcccttggatagttcctgtcagtttaatcctcttgaccaaggt
atagtaacccatcaacaagatgcatcttcacaatatgtggagaagcaaaatgaaatttct
caatctgatgagaagctctctacagaccattcattgatcaaggaagtcatccagctaaat
gctgatgtaggtcatagcttagttaatgattcaacggttgaagtgtgctcttcaggctgc
gacactgtaaacccgtcacaggttaaggaatctgaagttatttttcttccttataaagaa
gatgcttcatctagttttgagttattgggagaagaaattgagatcacctcagaagtggtc
agtgatgaacatgcttctcaagaatttgatggctttggagacttattcaatgaacctgaa
gttaccttggagcttgggacctcatatcctgcttgtgaggcaactgatgccatgaaaaat
gaagtgggaaatagtagtgattctgatcctggtgaggttgataattctgatgtttccgtg
tcggtcgagagttgtttggccttttttacaaggcccgagcttctttccaaggacgagtat
gcttggcagtgtgataattgctcaaaagttttgcaacaaggaacaaggaggaaattgcga
aagcttaaaaccaaaatagtgccaaatggttgtgatgatacaaatgcaaatggtccgttg
gagggttgcggcaataatctccatgaagttgagatcatcagcgggatgatggaaaatgat
gcatttgatggttccgatggcatgttggtgccacacaatcaggagatgcatgatatcagc
aatagcatgctcagcaaccatcaagaaagcaagatgaatatgatagcttgtcaatcagaa
aaccaagtgtctatgaagccaaatttgtgtcatggtatgtcagaatgttcatgttccaat
agtcaaattcttgattcatgctgtggtaaacgtgatgctgatagtgttgggcttactgaa
actgatttattgcctgaaaaatgtgaatcagaggtgagtgagggagaggaggtggactca
aagagtctcaaagtaaagagggatgcaactaagagtatactaatcagtaaggctccttct
gtgttgacaatccatctaaagaggtttagtcaagatgctcgaggtcgcttgagtaaatta
aatggacatgtgaatttcagagagacgattgatttcaatccatatatgaagcccaggtgc
accaatgttggaaagcgcacttaccgtctccttggagcagtcgagcacagtggaaacatg
aggagtggccattatgtggcatacatgagaggaggccaaggagatagcaccatttggtat
tatgccagtgatactcacgttcgtcaagtttcgttggaagaagttcttagctgtgaggcc
tacattttgttctatgaaggaacttga
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