Primulina eburnea: 140833217
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Entry
140833217 CDS
T11060
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pebu Primulina eburnea
Pathway
pebu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140833217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140833217
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140833217
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140833217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
140833217
NCBI-ProteinID:
XP_073053754
LinkDB
All DBs
Position
1:complement(57288751..57290232)
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AA seq
270 aa
AA seq
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MSLLPKSDSIQIRDVWADNLDEELALIRDIVDDYPYIAMDTEFPGIVLRPVGNFKNSGDY
HYQTLKDNVDLLKLIQLGLTFSDENGNLPTCGSDKYCIWQFNFREFNPNEDVFANDSIEL
LRQSGIDFAKNNEKGIDAKLFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQSLP
DTQSGFFTLINVYFPVLYDVKHLMKFCNSLHGGLNKLAELLEVDRVGVCHQAGSDSLLTC
CTFKKLKENFFIGSMEKYSGVLYGLGVENG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgcccaaaagcgattcgattcaaatcagggacgtttgggccgataatttg
gatgaagaattggcattgattcgtgatattgtcgatgattatccttatatcgccatggac
accgagttcccgggaattgttcttcgtcccgtgggaaacttcaagaactcgggtgactac
cactaccagacattgaaagataatgttgacctgttgaagctaatccagctaggactaaca
ttctcggacgaaaacggaaatctgcccacttgtggtagtgacaagtattgcatttggcaa
ttcaatttccgcgaattcaatccaaatgaggatgtctttgcgaatgactcaatcgagctg
ttgcgacaaagtggtattgatttcgcaaagaataacgaaaagggcattgatgccaagctt
tttggggagcttttaatgtcatctggtatcgttttgaatgacaacgtgtactgggtgacg
tttcatagtgggtatgattttgggtacttgctcaagctcttgacatgtcagagcttgcct
gatacgcagtctggattctttaccttgatcaatgtgtactttccagtgctttacgatgtc
aaacatttgatgaaattttgtaacagtttgcatggtgggttgaataagttggcggagttg
ttggaagtggacagagttggggtctgtcatcaggcaggttctgatagcttgcttacttgt
tgtacattcaagaagttgaaagagaacttcttcatcggctcgatggagaagtattccggt
gtattgtatggtttaggtgttgagaatggatag
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