Primulina eburnea: 140836464
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Entry
140836464 CDS
T11060
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pebu Primulina eburnea
Pathway
pebu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140836464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pebu04131
]
140836464
Membrane trafficking [BR:
pebu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140836464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
140836464
NCBI-ProteinID:
XP_073058103
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Position
7:complement(1824555..1833974)
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AA seq
790 aa
AA seq
DB search
MMISDGVEDEEKWLTAGIAGIQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHK
YYELYMRAFDELRKLEIFFKEETSRGCSMVELYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGIQNPVRGLFLRSYLSQVSKDKLPDIGSEYEGDSDTVIDAVEFV
LQNFTEMNKLWVRMQYQGPTREREKREKERSELRDLVGKNLHVLGQIEGVDLEMYKETVL
PRVLEQVVNCKDELAQYYLMDCIIQVFPDVYHLQTLETLLNACPQLQSSVDVKTVLARLM
ERLSNYAASDVEVLPELFQVEAFAKLNNAIDKVIAAQDNMPIVGVVTLYASLLTFTLQVH
PDRLDYVDQILGACVKKLSGKERLDDSKATKLIISLLSAPLEKYKDIDTVLKLSNYPLVI
EFLSGQTNKEMANVIVQNIMKNRTCISTAEKADALFELIKGLIRDLNDFHDELDEEDFKE
EQSFVARLIQMMHSDDPKEMLKIICIVKKHILTGGAKRLPFTIPPLIFSTLKLIRRLESQ
DDSVSKEDDSAMPKKLFQIVTQTIEALSSVPVPELALGLYLQCAEAANDSDLEPVAYEFF
TQAYILYEEEITDSKAQVTTIHLIIGTLQRMHVFGVENRDALTHKATGYSAKLLKKPDQC
RAVYACSHLFWLDENDRIQDGERVLLCLKRAQRIANAAQQMSSATRGSSGSVLLYIEILN
KYLYFYEKGISQITADLIQGLIELITSTTGGENTTLDPAADAFFASTLRYIQFQKNKGGA
VAEKYEHINV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttcagacggagttgaagatgaagaaaaatggctaactgctgggatcgccggc
attcagcagaatgctttctacatgcatcgcgctcttgattctaacaatttgaaggatgct
ctcaagtattcagctcagatgctgtccgagcttcgcacttctaggctttcccctcacaag
tactacgagctttatatgagggcatttgatgaattgaggaaactagagatcttcttcaag
gaggagactagtcgtggctgctcaatggttgagctgtatgagctcgtccagcacgctggc
aacattttgcctagactgtacttgctctgtactgtgggttctgtttacataaaatccaaa
gaagctcctgctaaggatattcttaaagatcttgtagaaatgtgccgcggcatccagaac
cctgttcgtgggctctttcttaggagttatctctctcaagtcagtaaagacaaattgcct
gatattggttctgaatatgaaggagattccgatacagttattgatgccgtcgaatttgtt
ctccaaaatttcacggaaatgaacaaactttgggtccgaatgcaatatcagggaccaact
cgggaaagggagaagcgggaaaaagaaaggagtgagcttcgtgatcttgttggtaaaaac
ctccatgttctcgggcagatcgagggtgttgaccttgaaatgtataaagaaactgtgctt
cccagagttttagaacaagttgtcaactgcaaagatgagcttgcccaatactacttgatg
gattgcataattcaagtctttcccgacgtttaccatctgcagacccttgaaacactattg
aatgcttgccctcagcttcagtcctctgttgatgtaaaaacagttcttgctcggctaatg
gaaagactttcaaattatgctgcttctgatgttgaagtattaccggaactttttcaagta
gaagcgtttgccaagttgaacaatgctatagacaaggtgatagcagcacaagataatatg
cctattgttggagtagtaactttgtatgcttctctgttgacatttactcttcaagtacat
cctgatcggcttgattatgttgaccaaattcttggagcatgcgtaaagaaactttcagga
aaagaaaggcttgatgacagcaaagcgacaaaactgatcatttctcttctaagtgctcca
cttgagaaatataaagatattgatactgtgttgaagctgtcaaattatcctcttgtcata
gaatttctaagtggtcaaacaaataaggagatggccaatgtaattgttcaaaacataatg
aaaaacaggacttgcatttcaactgccgagaaggcagatgcattgtttgaattgattaag
gggctcattagagacttgaacgattttcatgatgagcttgatgaggaggatttcaaagag
gagcagagttttgttgcacgtcttatccaaatgatgcacagtgatgatccaaaagagatg
ttgaagatcatctgtattgtgaagaagcatattttgacaggaggagcaaagagactgcca
tttactatccctccacttatatttagtaccttaaagttgataaggcgactggaaagtcaa
gatgatagtgtatccaaggaagatgactcagctatgccaaaaaaattatttcagatagtg
acgcagacgattgaagctttgtccagcgttccagttcctgaactggccctagggttgtat
ctgcagtgtgctgaggctgcaaatgactcggatttagaacctgttgcatatgaatttttc
actcaagcttatattttatatgaagaagaaatcacggattcgaaagctcaagtaaccacc
atacacctaattatagggacacttcaaagaatgcatgtctttggcgttgagaacagggat
gcattaacacacaaggccacagggtattctgctaagctgttgaagaagcctgatcaatgc
agagctgtctatgcatgttcccaccttttttggcttgatgaaaatgacagaatccaggat
ggagagagggtcttgctttgcttgaaacgtgctcagagaattgcaaatgctgcgcaacaa
atgtccagtgcaactcgagggagcagcggatcagttttactctatatagaaatattaaac
aagtatctctacttctacgagaaggggatctcacagattactgctgatttaattcagggc
ttgattgaattgatcacaagtacaacaggtggtgaaaacacgacacttgatccagcagca
gatgctttttttgccagtacgctaaggtacattcaatttcagaagaacaaaggcggtgca
gtggcagagaaatacgagcatatcaatgtctaa
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