KEGG   Primulina eburnea: 140837020
Entry
140837020         CDS       T11060                                 
Name
(RefSeq) uncharacterized protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
pebu  Primulina eburnea
Pathway
pebu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140837020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pebu03019]
    140837020
   03041 Spliceosome [BR:pebu03041]
    140837020
Messenger RNA biogenesis [BR:pebu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140837020
Spliceosome [BR:pebu03041]
 Complex B
  Other components
   Prp19-related factors
    140837020
 Complex C
    140837020
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 TPR_19 PPR
Other DBs
NCBI-GeneID: 140837020
NCBI-ProteinID: XP_073059086
LinkDB
Position
7:6758279..6764245
AA seq 913 aa
MAIPQELYPSEEDYLYEEEVLRNPNSVKLWWRYLIARGEAPFRKRAIIYERALKALPGSY
KLWQAYLRERLELVRNLPINHAQYQTLNNTFERALATMHKMPRIWIMYLQSLTRQKLISK
TRHSFDRALCALPVTQHDRIWEHYLVFVSQKGVPVETSLRVYRRYLKYDPSHIEDFIEFL
VNSELWQEASERLAGVLNDDRFYSLKGKTKHRLWLELCDLLTQHASEVSGLNVDAIIRGG
IKKFTDEVGRLWTSLADYYIRRGLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESML
SIKMENMDVSDDEDNVENENEEKEEEEVDDRLDFEKLKKSMDTFWLKDDKDVDMRLARLE
YLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPH
TLWVAFAKLYESHRDVANARVIFDKAVQVNFKAVDHLASIWCEWAEMELRHKNFKGALDL
MRRATAEPSVEVKRRVAADGNKPVQIMLHKSLKLWTFYVDLEESLGSLESTRAVYERILD
LRIATPQIIINYSMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK
LERARELFEHAVEMAPAEAVKPLYLQYAKLEEDFGLAKRAMRVYDQATKAVPANEKMGMY
EIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKVMCSKYAELERSLGEIDRSRALYKHA
SQFADPRSDPDFWNKWHEFEVQHGNEDTFREMLRVKRSVSASYSQTHYILPEYLMQKDQM
QTLDEAKDVLKKAGVDDDEMAALERQLVPTLNDAKVKDSGRRLGFVSGGMQNEGESVSNR
EDIELPEESDSEDDEKVEIAQKDVPTAVFGGLVRKREESDKDVEAPDSTISESKDNDAHL
GALERIKRMKRGA
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggcgataccacaggagttgtatccaagtgaagaggactacctttacgaagaagaagtg
ctccgcaacccgaatagcgtcaaactttggtggcggtatttaattgcccgtggagaagcc
cctttccgaaagcgtgccattatttatgagcgcgctctcaaggcattgccaggaagctac
aagctttggcaagcatacctccgggaacgccttgagctagttaggaatctacctattaat
cacgcacagtaccaaaccttgaacaacacgtttgagcgagctctggcgacaatgcataag
atgcctcgcatttggataatgtatttgcagtcattgactcgtcagaagttgatttccaag
acgcggcactcctttgatagagctttgtgcgctctcccagttacccaacatgataggatt
tgggaacattatttagtatttgtttcgcagaagggtgtacctgttgaaacttcattgaga
gtgtacaggaggtacttgaagtatgacccgagtcatattgaggattttattgagtttttg
gttaattcagagttgtggcaggaagcttcagagaggctggcaggggttttgaatgacgat
cgattttactctctaaaggggaagacaaagcacaggttgtggttggaattgtgcgacctg
ttgacacaacatgctagtgaggtatcagggttgaatgtggatgcaataattcggggagga
attaagaaatttacggatgaggttggcagactttggacatccttggcggattattatatt
aggaggggattactggagaaggccagagatatttttgaggaaggcatgactacagtgatt
acggtgagggattttagtgttatatttgatgcatattctcagtttgaagagagtatgttg
tccattaagatggaaaatatggatgttagtgatgacgaggataacgtggagaatgaaaat
gaagagaaggaagaggaggaggtggatgataggttggattttgagaagttgaagaagagc
atggacacattttggttgaaggatgacaaggatgtggatatgagattggcaaggttggag
tatctgatggataggagaccagagttagctaacagtgtgctcttgaggcaaaatcctcat
aatgtagagcagtggcaccggagggttaagctctttgaagggaaccccacgaagcaaatt
ttgacttacacggaggcagtgaggacagtagatccgatgaaggctgttgggaagccgcat
actttgtgggttgcatttgctaagttgtacgagagtcaccgagatgttgctaatgcccgg
gtgatttttgacaaggcagtacaggtcaattttaaggctgtggaccatctggccagtatt
tggtgtgaatgggcggagatggagctcaggcacaaaaattttaagggtgcactagatttg
atgcgtcgagctactgcagagccatcagttgaggtcaagagaagagtggctgctgatggc
aacaaaccggtgcaaattatgcttcacaagtctcttaagctttggacgttctatgtggat
ttggaggaaagcttgggtagtctggagtcaactcgtgcagtttacgaaagaatattagat
ttgagaatagccacaccccaaattattataaactactcaatgctcttagaagataacaag
tactttgaagatgcttttaaggtttatgagagaggtgtgaagattttcaaatacccccat
gtgaaagatatctgggtcacttacctttcaaagtttgtcaagagatatgggaaatcaaag
ctagaacgagcacgagagttatttgagcatgctgttgaaatggcacctgcagaagcagtg
aaacctctgtatcttcaatatgcaaagctagaagaagactttggtctggctaaaagagca
atgagagtatacgatcaggcaacaaaagctgtccctgctaatgagaaaatgggcatgtat
gaaatatacatagcccgtgctgctgaaatatttggtgtaccgaaaacgcgagagatttat
gaacaagcaatagaatctggcctccctgacaaagatgtcaaggtcatgtgttcgaagtat
gcggagcttgagagaagcctcggagaaattgaccgcagtcgtgcattatataaacacgct
tcacagtttgctgaccctagatctgaccctgacttctggaataagtggcacgagtttgaa
gtgcagcatggaaatgaagatactttccgagagatgctccgagttaaaagaagtgtttct
gcaagctatagccagacacattatatccttccagagtatttgatgcaaaaggatcaaatg
cagacccttgatgaggcaaaggacgtactaaagaaagctggtgtcgatgatgatgaaatg
gctgccctcgaaaggcagttagtccctactctcaacgatgccaaagttaaagatagtggt
agacgattaggatttgtcagtggggggatgcaaaatgaaggcgagtccgtttcaaatagg
gaggatatagagcttccagaagaaagtgattctgaagatgatgagaaggttgagatagcg
cagaaagatgttccaacagctgtgtttggaggtctggtgcggaaaagagaagaatctgat
aaagacgtggaagctcctgattcaactatttctgaaagcaaagataatgatgcccatctt
ggtgccttggagagaataaaaaggatgaagcgaggtgcatag

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