Primulina eburnea: 140837238
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Entry
140837238 CDS
T11060
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pebu Primulina eburnea
Pathway
pebu03030
DNA replication
pebu03410
Base excision repair
pebu03420
Nucleotide excision repair
pebu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140837238
03410 Base excision repair
140837238
03420 Nucleotide excision repair
140837238
03430 Mismatch repair
140837238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pebu03032
]
140837238
03036 Chromosome and associated proteins [BR:
pebu03036
]
140837238
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140837238
DNA replication proteins [BR:
pebu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140837238
DNA Replication Termination Factors
ELG1-RFC complex
140837238
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140837238
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140837238
Check point factors
HRAD17(Rad24)-RFC complex
140837238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_11
AAA_16
AAA_5
AAA_14
AAA_24
AAA_assoc_2
AAA_2
SLFN-g3_helicase
nSTAND3
ResIII
PhoH
AAA_19
AAA_28
AAA_7
AAA_30
DUF3853
AAA_18
AAA_25
Parvo_NS1
RNA_helicase
DNAX_ATPase_lid
DUF815
bpMoxR
IstB_IS21
TIP49
Cdc6_lid
NPHP3_N
T2SSE
ATPase_2
NB-ARC
Motif
Other DBs
NCBI-GeneID:
140837238
NCBI-ProteinID:
XP_073059421
LinkDB
All DBs
Position
7:complement(11710910..11717204)
Genome browser
AA seq
341 aa
AA seq
DB search
MAPLLQSSQPWVEKYRPRQVKDVAHQDEVVRVLTHTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSARQSGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLVSRCAKFRFKPLTEEIMSS
RVIYICKEEGLDLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSISSKDLISVSGVIP
AEVVQALFSACRSGNFDLADIEVKNVIAEGYPVSQMLSQLYDIIVEAGDISDEQKARICK
KFAVADKCLADGAEEYFQLLDVASNIMRAIRNMPQEFSFGN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgccactgttgcagagctcgcagccatgggtcgaaaaatatcggccaaggcaagtg
aaggacgtagctcaccaagacgaggtcgttcgagtgctcacccacactctcgagacggct
aattgtccacacatgctcttttatgggcctcctggtacggggaaaacaactactgccctt
gcaattgcccatcagcttttcggacctgaactatacaagtcaagagtgctggagctgaat
gctagtgacgatcgagggattaatgttgttcgcacaaaaattaaaaactttgctgctgta
gctgttggttctgctcgccaaagtggctatccttgcccaccgtataagatcattattctt
gatgaggcggattcaatgacagaagatgctcagaatgccttacgacggacaatggagaca
tactcaaaagttacaagattcttcttcatttgcaattatatcagcagaattatagagcca
cttgtctctagatgtgcaaagttccgatttaagccactgactgaagaaataatgagcagt
cgtgtgatatatatttgcaaagaagagggtcttgatttggattcagaggctctttcgacc
ctaagttccatttctcaaggtgatcttcgtcgtgccataacataccttcaaggtgctgct
cgcttatttggatcttcaatttcatccaaagacttgattagtgtgtctggtgtcatccct
gcagaggtcgttcaggccctgttttctgcctgcagaagtggtaactttgacttggctgac
atagaagtcaaaaatgtgattgctgaaggatatccagtttctcaaatgctttctcagttg
tatgatataattgtcgaagcaggtgatatatcagatgaacagaaagcaagaatttgcaaa
aaatttgcggtggcagataagtgtcttgcagatggagcggaggagtattttcaattgctg
gatgtggctagtaatattatgcgtgcgattcgtaatatgccccaagaattttcctttggg
aattga
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