Primulina eburnea: 140837291
Help
Entry
140837291 CDS
T11060
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pebu Primulina eburnea
Pathway
pebu03013
Nucleocytoplasmic transport
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140837291
09122 Translation
03013 Nucleocytoplasmic transport
140837291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140837291
03041 Spliceosome [BR:
pebu03041
]
140837291
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140837291
Spliceosome [BR:
pebu03041
]
Complex C
Other components
EJC/TREX
140837291
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140837291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
140837291
NCBI-ProteinID:
XP_073059510
LinkDB
All DBs
Position
7:complement(19316724..19357623)
Genome browser
AA seq
1811 aa
AA seq
DB search
MSLPSLECIYFTEDSIRELKNSNFKFPSPAPVLRFLYELCWTVVRGDLPLQKCKVALEAV
EFSDCGPEGDVGSYFADVVSQMAQDLSMLGDYRSRLIKLAKWLVESTLVPLRFFQERCEE
EFLGETEMIKIKAADLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLSQVPKASTE
NASAATIGIIKSLIGHFDLDPNRVFDIVLECFELQLDNSVFLELIPMFPKSPASQILGFK
FQYYQHTEINNSVPNGLYQLAALLVKKDFIDVDSIYAHLRPKDEEAFEQYNAFSVKRLDE
ANKIGKINLAATGKDLMDDEKQGDVTVDLFTALDMERVAVAERSSELANNQALGLLIGFL
AVDDWFHAHQLLERLSPLNPVEHDQICQGLFRLIEKQVSSAYKVVCQLRVSICDASYGTG
VDSEAANVYLKKSFINLPNELFEMLASAGPYLYRDTLLLQKTTRVLRAYFLCAFELVNDA
DGAFCTRTDSFENLNPRLHLKDARLKIEEALGTCLLPSLQLIPANPAIGQEIWELMSLLP
YEVRYRLYGEWEKDDERFPMVLAARQTARLDTRRILKRLAKENLKQLGRMVAKLAHANPM
TVLRTIVHQIEAYRDMIAPVVDAFKYLTQLEYDILEYVVIERLAQGGREKLKEDGLNLSD
WLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGHGIELVLLQELIQQMANVQYTENMT
EEQLDAMAGSDTLRYQATSFGITRNNKALIKSTNRLRDALLPKEENKLAIPLLLLIAQHR
SVVVIKADVPYIKMVCEQFDRCHGTLLQYVEFLCCAVTPASSYALLIPTLDELVHKYHLD
PEVAFLVYRPVMRLFRCQNTSSFFWPLDCNEAVNPATAEKESEASDLSSKLVLDIGSCLK
TFSWFNLLETIRTMLPSKAWNSLSPDLYATFWGLTLYDLHVPRNRYESEITKQHAALKAL
EELSDNSSSAIAKRKKDKERIQESLDRLIMELQKHEEHVKSVHRRLAHEKDTWLSSCPDT
LKINMEFLQRCVFPRCTFSMPDAVYCAIFVNTLHSLGTPFFNTVNHIDVLICKTLQPMIC
CCTEYEVARLGRFLFETLKTAYHWKSDETVYERECGNMPGFAVYYRYPNSQRVTYGQFIK
VHWKWSQRITRLLIQCLESTEYMEIRNSLIMLTKISSVFPVTRKSGINLEKRVAKIKNDD
REDLKVLATGVSAALSARKPSWVTDEEFGMGYLDIKPAPAPAPKLLSGNATTVQNGTGNL
SQIEQIGGRAVSVGSLHLDSGNSTKDSRRPDAGTSNTVDVLKQVEESASKHFEEAAKVNT
KSSMDTEVRPLVKRSATAGSLGKQTKHDLTKDDGRSGKVVGKTSGNASTSVASAKGTNSS
TRSSDPNTETKPDIVNSKLSDSRVSGGKDDDTESTEVNKQPLSWSIHSPRQENNVKSEKP
LKRLSPAGEHERLNKRRKGESDMRDLDGSDIRIFEKERPSDARSADKLQPITFEKAVPDE
LSISRVMDKPVDRSKDKSSERYDRDYKDRLERPEKSRGDDLLSEKLRDRSLEKHGRERSL
EKVQEKGTDRNFDRLGKDDKNKDERSKVRYTEVSADKSHVDDKFLGQSLPPPPPLPPHVI
PHSVNASRKDEDADRRFGNARHPQKLSPRHEERERRRSEENTLLLQDDSKRRREDEFRDR
KRDERDASTIKVEDRERDKTNINKDDVNSTSKRRKLKREHILSEPGEFLPALAPAPPPLS
INLSESHDGRERGDHKGIMVQRPGYIDESGMRIHGKEAVSKTTRRDVDLMYDRDWDDDKR
QRVEPKRRHRK
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgccttctcttgagtgcatatacttcaccgaagactccattagagagctaaag
aattcgaatttcaagttcccttccccagctccagttcttcgctttctttatgaactctgc
tggacagtggttcgaggggacttgcccttacagaaatgtaaagtggctttggaggctgta
gagttttctgattgtggtcctgaaggggatgttggatcatattttgccgatgttgtatcc
caaatggctcaagatctttccatgcttggtgattatcgttctcgccttataaaactggct
aaatggctggtggaatctaccctggttcctttgaggttttttcaagagcgctgtgaggaa
gagtttttgggggagactgaaatgatcaagataaaggctgcagatcttaaatcaaaagag
gttcgagtaaatactcgtcttctataccaacaaaccaagtttaacttgctccgagaagaa
agtgagggctatgctaagctggtcaccctcctctctcaagttcctaaagcatcgactgaa
aatgcatcagctgcaacaattggcattatcaagtcattgattggtcactttgatcttgat
ccaaatcgagttttcgatattgtgttggaatgcttcgagcttcagcttgataacagtgtt
tttttggaattaattccgatgtttcccaagtcccctgcttcacaaattcttgggttcaag
tttcaatattatcagcacacggaaattaacaattctgtaccgaatggactctatcaactt
gctgcattgttggtaaagaaagacttcattgatgttgatagcatatatgcccatttacgt
cccaaggacgaagaggcatttgagcaatataatgctttttctgtaaagagacttgatgag
gccaataaaattgggaaaattaaccttgcggccactgggaaggacctcatggatgacgag
aaacaaggagatgtgactgtagatctttttactgctttagacatggaaagagtggcagtt
gctgaaagatcctcggagcttgcaaataatcaagccctaggtctactgattggcttcctt
gccgtagatgattggtttcatgctcatcagctattggagcgtctctcacctctcaatcct
gtggaacatgaccaaatttgtcaggggttgtttcggcttattgaaaaacaagtttcctca
gcttacaaagtcgtgtgccaattgagagtttcaatttgtgatgcatcctatggtactggt
gttgattcagaggcagcaaatgtatacctcaaaaaatccttcatcaatctaccgaatgaa
ctgtttgagatgcttgcttctgctggaccttatctttaccgtgacacattattactgcag
aagaccactagagtgttgagagcttattttctttgtgcctttgagcttgttaacgatgcc
gatggggcattttgtactcgtactgattctttcgaaaatctgaatcctcgccttcacctg
aaagatgcaagattaaaaattgaggaagcacttggtacatgtcttcttccttctttgcag
ttgattcctgctaatcctgcaattggacaggagatatgggaactaatgtcccttcttccg
tacgaggtgcgataccgtttgtatggtgaatgggaaaaggatgacgagcgttttccaatg
gttttggcagcaaggcaaacagcgaggttggatactcgtaggattttaaaacgcctcgcc
aaagaaaatttaaagcagcttggtagaatggttgccaaattagctcatgcaaatccaatg
acagtgcttcgaacaattgttcatcagattgaggcgtacagggatatgattgctccagtt
gtggatgctttcaaatatttgacgcagcttgagtatgatatcctggaatatgttgtcatc
gaacgcttggctcaaggtggacgcgagaagcttaaagaggatggtcttaatttgtcagac
tggctccaatcactggcatcattttggggtcacttgtgtaaaaaatatccatcgatggaa
cttaggggtctttttcagtatcttgtaaatcagttgaaaaagggacatggaattgagctc
gttctccttcaggagctgatacagcagatggcgaatgtccagtatacagaaaatatgaca
gaagaacaattggatgccatggctggaagtgacactcttcgatatcaggctacttcattt
ggcattaccaggaacaacaaggctttgatcaagtccactaacaggcttagagatgctttg
ctcccgaaggaggaaaacaaattggcgattcctcttttgctactcattgcccagcatcgt
tctgtggttgtcataaaagcagatgtgccgtacatcaaaatggtctgtgaacagtttgac
agatgtcacgggaccctccttcagtatgtggaatttctttgttgtgcggtgactcctgca
tcaagttatgctttgctgattcccactcttgatgaacttgtacataaatatcacctcgat
cctgaggtggcctttttggtatatcgaccggtgatgagactctttaggtgtcaaaatact
tccagcttcttctggccattagactgtaatgaagcagtgaaccctgctactgcagaaaag
gagtctgaggcctcagatttatccagcaaattggttctagatattggatcttgtctcaag
actttctcatggtttaatcttcttgaaactatcagaacaatgttgccctcaaaagcgtgg
aatagcttgtctcctgatttgtatgcgacattttggggtctcactctctatgatctccat
gtacccagaaatcgttatgaatctgaaattacaaagcagcatgctgctcttaaagctctc
gaagaactttctgataattccagttctgcaattgctaaaaggaagaaagataaagaaaga
atccaggagtctctagatcgattgattatggagctccagaagcatgaagaacatgttaaa
tctgtacatcgaaggcttgctcacgaaaaggatacatggttgagttcttgccccgatact
ttaaaaatcaacatggaatttctgcagcgctgtgtttttccccgttgtactttcagtatg
cccgatgctgtatattgcgcaattttcgtaaatacgctccattccttgggaacaccgttc
ttcaacacagttaaccatatagacgttctgatctgtaaaaccttacaaccaatgatatgc
tgctgcactgagtatgaagtggctcgactaggaagatttctatttgagacactgaaaact
gcttatcattggaagagtgatgaaacagtttatgaaagagaatgtggaaacatgccagga
tttgctgtttactacagatatccaaacagccaacgtgtcacatatggtcaatttatcaag
gtgcactggaaatggagccagaggatcaccagactacttattcagtgcttggaatcgaca
gagtacatggagattcgcaattctcttattatgttaactaaaatatcaagcgtttttcct
gttactcggaagagtggtatcaaccttgaaaagcgggtggctaaaattaaaaatgatgac
agagaggatctcaaagttttggctactggtgtttctgcagctttgtctgctagaaagcct
tcatgggtgacagatgaagaatttggcatgggttatctggacataaagcctgctccagca
cctgctcccaagcttttatcgggtaatgctacaactgtgcaaaatggtactggaaacctt
tctcagattgagcaaattgggggtagagcagtttctgtaggaagcttacatttagattct
ggcaattccaccaaagactcgagaagacccgatgctggaacatcgaacacagttgacgtt
ctaaaacaggtggaagaatctgcaagtaaacattttgaagaagccgcaaaagttaatacc
aagtcctctatggatactgaggttcggcctctggtaaaaagatctgcaacagcaggatct
cttggaaagcaaacaaagcatgatcttaccaaagatgatggtagatctggaaaagttgtt
ggcaaaacttcaggaaatgcaagcacgagtgttgcttcagctaaaggaacaaactcatct
acacgatcttctgatcctaacaccgaaacaaaaccagatattgtgaattccaagttatct
gattcaagggtttctggtggaaaggatgatgatactgaatctacagaagtgaacaaacag
cctttgtcttggtctattcactctcccaggcaggaaaataacgtgaagtctgagaaaccg
ctgaagagactcagtccagccggagagcatgagaggctaaataaacgtcggaaaggggaa
agtgatatgagagacttagatgggagtgacattagaatatttgagaaagagaggccaagt
gatgcacgatctgctgataaacttcaaccaataacttttgaaaaggcagtccctgatgaa
cttagcattagcagggtcatggataaacctgtggataggtcaaaagataagagtagtgaa
agatatgatagggattacaaggatcggttggagcgtcctgaaaagtctcgtggtgatgat
ttgttatctgaaaaattgagagacaggtcattggaaaagcatggaagagaacgatccctt
gaaaaagtccaagagaaaggtactgataggaattttgataggctaggtaaggatgataaa
aataaagatgaaagaagcaaagtgcggtacactgaagtatctgcagataaatcacatgta
gatgataaatttcttggccaaagcttgcctccaccaccacctctccctccacacgtcatc
ccccattcagttaatgccagtaggaaggatgaagatgctgatagacgatttggaaatgcc
agacatccacaaaagctttctcctaggcatgaagagagagaacgcagaagatctgaagag
aatactttattattgcaggatgattcaaaacggagaagagaagatgaatttcgagataga
aaacgtgatgaaagggatgcatcaactatcaaggtggaggatagggagagggataaaacg
aacattaacaaggatgatgtgaactcaacttctaagaggcgtaaactcaaacgagagcac
attttgtcagagcctggagaatttttaccggctctggcaccggcaccaccacctctgtca
attaatctgtcggagtcacatgatggaagagagcgaggtgatcataagggcataatggtc
caacgcccgggttatatagatgagtcgggcatgaggatacatggcaaagaagcagtcagc
aagacaacaaggcgtgatgtcgatctaatgtacgacagagattgggatgatgacaagagg
cagagagtcgaaccaaagagaagacatcgcaagtaa
DBGET
integrated database retrieval system
